ggKbase home page

PLM4_5_b1_sep16_scaffold_2152

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_5_b1_sep16_scaffold_2152_1
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

133..1761
DNA (1629bp) protein (543aa)
Response regulator receiver modulated serine phosphatase Tax=Pedosphaera parvula Ellin514 RepID=B9XP30_9BACT
Response regulator receiver modulated serine phosphatase {ECO:0000313|EMBL:EEF58386.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Serine phosphatase RsbU regulator sigma subunit
PLM4_5_b1_sep16_scaffold_2152_2
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

1821..2117
DNA (297bp) protein (99aa)
Anti-sigma factor antagonist Tax=Pedosphaera parvula Ellin514 RepID=B9XP32_9BACT
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
anti-anti-sigma factor
PLM4_5_b1_sep16_scaffold_2152_3
bacterium UASB14, Bacteria

Not on your lists

2114..3577
DNA (1464bp) protein (488aa)
Two-component hybrid sensor and regulator Tax=Arthrospira platensis RepID=D4ZRT5_ARTPN
Adenylate/Guanylate Cyclase {ECO:0000313|EMBL:GAK53851.1}; species="Bacteria.;" source="bacterium UASB14.;"
two-component hybrid sensor and regulator
PLM4_5_b1_sep16_scaffold_2152_4
RBG_19FT_COMBO_Chloroflexi_56_12_curated, Chloroflexi, Bacteria

Not on your lists

3584..3922
DNA (339bp) protein (113aa)
Putative uncharacterized protein Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JQ52_9BACT
Tax=RBG_19FT_COMBO_Chloroflexi_56_12_curated
PLM4_5_b1_sep16_scaffold_2152_5
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

comp(4087..4797)
DNA (711bp) protein (237aa)
hypothetical protein Tax=Verrucomicrobia bacterium SCGC AAA164-I21 RepID=UPI00035EE061
Cyclic nucleotide-binding protein {ECO:0000313|EMBL:EDY18332.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
Crp/Fnr family transcriptional regulator
PLM4_5_b1_sep16_scaffold_2152_6
Desulfobulbaceae bacterium BRH_c16a, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5024..5479
DNA (456bp) protein (152aa)
metal transporter Tax=Pseudomonas putida RepID=UPI0002F4C5F4
Uncharacterized protein {ECO:0000313|EMBL:KJR99087.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae.;" source="Desulfobulbaceae bacterium BRH_c16a.;"
hypothetical protein
PLM4_5_b1_sep16_scaffold_2152_7
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

5476..6570
DNA (1095bp) protein (365aa)
Calcium/proton antiporter, CaCA family Tax=Chthoniobacter flavus Ellin428 RepID=B4CU85_9BACT
Calcium/proton antiporter, CaCA family {ECO:0000313|EMBL:EDY22123.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
calcium/proton exchanger protein
PLM4_5_b1_sep16_scaffold_2152_8
unknown

Not on your lists

7257..7952
DNA (696bp) protein (232aa)

This feature has no annotations

PLM4_5_b1_sep16_scaffold_2152_9
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8049..8708
DNA (660bp) protein (220aa)
Uncharacterized protein Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DJQ7_BRAJP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL11117.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum USDA 6.;"
PLM4_5_b1_sep16_scaffold_2152_10

Not on your lists

8705..9874
DNA (1170bp) protein (390aa)
Outer membrane protein/protective antigen OMA87 Tax=uncultured bacterium F42-01 RepID=I3VIJ1_9BACT
Outer membrane protein/protective antigen OMA87 {ECO:0000313|EMBL:AFK79197.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium F42-01.;"
glyceraldehyde 3-phosphate dehydrogenase
PLM4_5_b1_sep16_scaffold_2152_11
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9888..10562
DNA (675bp) protein (225aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI0003697443
Uncharacterized protein {ECO:0000313|EMBL:EPX56877.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter fuscus DSM 2262.;"
hypothetical protein
PLM4_5_b1_sep16_scaffold_2152_12
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10532..11053
DNA (522bp) protein (174aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI000381F434
Uncharacterized protein {ECO:0000313|EMBL:CDH45503.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contendobacter odensis Run_B_J11.;"
hypothetical protein
Displaying 12 items

View Taxonomy