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PLM4_5_b1_sep16_scaffold_2320

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_5_b1_sep16_scaffold_2320_1
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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1..474
DNA (474bp) protein (158aa)
prepilin peptidase (EC:3.4.23.43)
Peptidase A24A domain protein Tax=Pedosphaera parvula Ellin514 RepID=B9XG65_9BACT
Peptidase A24A domain protein {ECO:0000313|EMBL:EEF61227.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
PLM4_5_b1_sep16_scaffold_2320_2
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(628..1035)
DNA (408bp) protein (136aa)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:0000256|HAMAP-Rule:MF_00300}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Chorismate synthase Tax=Pedosphaera parvula Ellin514 RepID=B9XG57_9BACT
aroC; chorismate synthase
PLM4_5_b1_sep16_scaffold_2320_3
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(993..1604)
DNA (612bp) protein (204aa)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:0000256|HAMAP-Rule:MF_00300}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
chorismate synthase (EC:4.2.3.5)
Chorismate synthase Tax=Pedosphaera parvula Ellin514 RepID=B9XG57_9BACT
PLM4_5_b1_sep16_scaffold_2320_4
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

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2020..2454
DNA (435bp) protein (145aa)
hypothetical protein Tax=Verrucomicrobia bacterium SCGC AB-629-E09 RepID=UPI000373B252
NusG antitermination factor
NusG antitermination factor {ECO:0000313|EMBL:ACB76915.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
PLM4_5_b1_sep16_scaffold_2320_5
GWF2_Lentisphaerae_52_8_curated, Lentisphaerae, Bacteria

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2827..3558
DNA (732bp) protein (244aa)
Sugar transferase bin=GWF2_Lentisphaerae_52_8 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae
undecaprenyl-phosphate galactose phosphotransferase
Tax=GWF2_Lentisphaerae_52_8_curated
PLM4_5_b1_sep16_scaffold_2320_6
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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3555..4724
DNA (1170bp) protein (390aa)
Oxidoreductase domain protein Tax=Pedosphaera parvula Ellin514 RepID=B9XD16_9BACT
Oxidoreductase domain protein {ECO:0000313|EMBL:EEF62362.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
oxidoreductase domain-containing protein
PLM4_5_b1_sep16_scaffold_2320_7
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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4721..5206
DNA (486bp) protein (162aa)
Transferase hexapeptide repeat containing protein Tax=Pedosphaera parvula Ellin514 RepID=B9XD17_9BACT
Transferase hexapeptide repeat containing protein {ECO:0000313|EMBL:EEF62363.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hexapaptide repeat-containing transferase
PLM4_5_b1_sep16_scaffold_2320_8
RBG_16_Deltaproteobacteria_64_85_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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5227..6333
DNA (1107bp) protein (369aa)
Pleiotropic regulatory protein bin=GWB2_Pelobacter_53_15 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Pelobacter_53_15 organism_group=Deltaproteobacteria organism_desc=Good
aminotransferase
Tax=RBG_16_Deltaproteobacteria_64_85_curated
PLM4_5_b1_sep16_scaffold_2320_9
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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6422..8569
DNA (2148bp) protein (716aa)
Lipopolysaccharide biosynthesis protein Tax=Pedosphaera parvula Ellin514 RepID=B9XD19_9BACT
Lipopolysaccharide biosynthesis protein {ECO:0000313|EMBL:EEF62365.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
PLM4_5_b1_sep16_scaffold_2320_10
Candidatus Omnitrophus sp. SKK-01, Candidatus Omnitrophus, Omnitrophica, Bacteria

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8806..9777
DNA (972bp) protein (324aa)
hypothetical protein Tax=Aminicenantes bacterium SCGC AAA252-F08 RepID=UPI0003B36E69
Group 1 glycosyl transferase {ECO:0000313|EMBL:KJJ85938.1}; species="Bacteria; Omnitrophica; Candidatus Omnitrophus.;" source="Candidatus Omnitrophus sp. SKK-01.;"
group 1 glycosyl transferase
Displaying 10 items

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