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PLM4_5_b1_sep16_scaffold_2427

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_5_b1_sep16_scaffold_2427_1
unknown

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2..88
DNA (87bp) protein (29aa)

This feature has no annotations

PLM4_5_b1_sep16_scaffold_2427_2
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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142..1710
DNA (1569bp) protein (523aa)
Proton-translocating NADH-quinone oxidoreductase, chain M {ECO:0000313|EMBL:EEF60822.1}; EC=1.6.99.5 {ECO:0000313|EMBL:EEF60822.1};; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Proton-translocating NADH-quinone oxidoreductase, chain M Tax=Pedosphaera parvula Ellin514 RepID=B9XHI7_9BACT
nuoM; NADH dehydrogenase subunit M
PLM4_5_b1_sep16_scaffold_2427_3
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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1730..3181
DNA (1452bp) protein (484aa)
NADH-quinone oxidoreductase subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_00445};; NADH dehydrogenase I subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; NDH-1 subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
NADH-quinone oxidoreductase subunit N Tax=Pedosphaera parvula Ellin514 RepID=B9XHI8_9BACT
proton-translocating NADH-quinone oxidoreductase, chain N
PLM4_5_b1_sep16_scaffold_2427_4
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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3262..3495
DNA (234bp) protein (78aa)
Uncharacterized protein Tax=Pedosphaera parvula Ellin514 RepID=B9XHJ0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF60825.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
gloB; Zn-dependent hydrolase, glyoxylase family
PLM4_5_b1_sep16_scaffold_2427_5
RBG_16_Nitrospirae_64_22_curated, Nitrospirae, Bacteria

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comp(3674..6553)
DNA (2880bp) protein (960aa)
Valine--tRNA ligase Tax=Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG 4299) RepID=E3I4Z1_RHOVT
valyl-tRNA synthetase
Tax=RBG_16_Nitrospirae_64_22_curated
PLM4_5_b1_sep16_scaffold_2427_6
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(6605..8164)
DNA (1560bp) protein (520aa)
2-isopropylmalate synthase/homocitrate synthase family protein {ECO:0000313|EMBL:EEF58617.1}; EC=2.3.3.13 {ECO:0000313|EMBL:EEF58617.1};; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
2-isopropylmalate synthase/homocitrate synthase family protein Tax=Pedosphaera parvula Ellin514 RepID=B9XNF8_9BACT
leuA; alpha-isopropylmalate/homocitrate synthase family transferase
PLM4_5_b1_sep16_scaffold_2427_7
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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8287..8688
DNA (402bp) protein (134aa)
hypothetical protein Tax=Verrucomicrobia bacterium SCGC AAA164-E04 RepID=UPI00037A7DE2
Uncharacterized protein {ECO:0000313|EMBL:EEF62351.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
PLM4_5_b1_sep16_scaffold_2427_8
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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8747..9151
DNA (405bp) protein (135aa)
hypothetical protein Tax=Verrucomicrobia bacterium SCGC AAA164-E04 RepID=UPI00036E22D9
Uncharacterized protein {ECO:0000313|EMBL:EEF62351.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
PLM4_5_b1_sep16_scaffold_2427_9
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(9272..9694)
DNA (423bp) protein (141aa)
hypothetical protein Tax=Rubritalea marina RepID=UPI00036D76E7
Uncharacterized protein {ECO:0000313|EMBL:EDY20637.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
PLM4_5_b1_sep16_scaffold_2427_10
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

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10137..11339
DNA (1203bp) protein (401aa)
pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein; K03737 putative pyruvate-flavodoxin oxidoreductase [EC:1.2.7.-] bin=ACD79 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=ACD79 organism_group=Chlamydiae organism_desc=Novel, branching deeply from Chlamydiae
pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric
Tax=GWF2_Verrucomicrobia_62_7_curated
PLM4_5_b1_sep16_scaffold_2427_11
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

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11336..13738
DNA (2403bp) protein (801aa)
Pyruvate-flavodoxin oxidoreductase Tax=Fischerella RepID=G6FPD9_9CYAN
pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric
Tax=GWF2_Verrucomicrobia_62_7_curated
PLM4_5_b1_sep16_scaffold_2427_12
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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13772..14773
DNA (1002bp) protein (334aa)
dihydroorotate oxidase bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=bin1_lowGC organism_group=Unknown_CP
dihydroorotate oxidase
Tax=CSP1_2_Dadabacteria
PLM4_5_b1_sep16_scaffold_2427_13
unknown

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comp(15553..16149)
DNA (597bp) protein (199aa)

This feature has no annotations

PLM4_5_b1_sep16_scaffold_2427_14
Pseudomonas alcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(16258..16887)
DNA (630bp) protein (210aa)
Ypar13 Tax=Pseudomonas alcaligenes RepID=Q939G0_PSEAC
Ypar13 {ECO:0000313|EMBL:AAK73298.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas alcaligenes.;"
Displaying 14 items

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