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PLM4_5_b1_sep16_scaffold_2457

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_5_b1_sep16_scaffold_2457_1
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

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2..1978
DNA (1977bp) protein (659aa)
Uncharacterized protein Tax=Pedosphaera parvula Ellin514 RepID=B9XG54_9BACT
hypothetical protein
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
PLM4_5_b1_sep16_scaffold_2457_2
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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2084..3499
DNA (1416bp) protein (472aa)
Uncharacterized protein Tax=Pedosphaera parvula Ellin514 RepID=B9XS19_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF57351.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
PLM4_5_b1_sep16_scaffold_2457_3
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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3496..4578
DNA (1083bp) protein (361aa)
hypothetical protein Tax=Rudanella lutea RepID=UPI000376027F
Uncharacterized protein {ECO:0000313|EMBL:ETZ21859.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
glycoside hydrolase
PLM4_5_b1_sep16_scaffold_2457_4
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(4606..5643)
DNA (1038bp) protein (346aa)
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00018957}; EC=2.3.1.234 {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00182339};; N6-L-threonylcarbamoyladenine synthase {ECO:0000256|HAMAP-Rule:MF_01445}; t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; tRNA threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
tRNA N6-adenosine threonylcarbamoyltransferase Tax=Pedosphaera parvula Ellin514 RepID=B9XP92_9BACT
ygjD; UGMP family protein
PLM4_5_b1_sep16_scaffold_2457_5
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(5663..6997)
DNA (1335bp) protein (445aa)
Carboxyl-terminal protease {ECO:0000313|EMBL:EEF58344.1}; EC=3.4.21.102 {ECO:0000313|EMBL:EEF58344.1};; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
carboxyl-terminal protease (EC:3.4.21.102)
Carboxyl-terminal protease Tax=Pedosphaera parvula Ellin514 RepID=B9XP93_9BACT
PLM4_5_b1_sep16_scaffold_2457_6
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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7250..7870
DNA (621bp) protein (207aa)
HNH endonuclease Tax=Pedosphaera parvula Ellin514 RepID=B9XRB4_9BACT
HNH endonuclease {ECO:0000313|EMBL:EEF57601.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
HNH endonuclease
PLM4_5_b1_sep16_scaffold_2457_7
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(8453..8812)
DNA (360bp) protein (120aa)
Uncharacterized protein Tax=Pedosphaera parvula Ellin514 RepID=B9XGP0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF61091.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
PLM4_5_b1_sep16_scaffold_2457_8
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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8977..9903
DNA (927bp) protein (309aa)
ParB-like partition protein Tax=Pedosphaera parvula Ellin514 RepID=B9XGP1_9BACT
ParB-like partition protein {ECO:0000313|EMBL:EEF61092.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
parB; chromosome partitioning protein
PLM4_5_b1_sep16_scaffold_2457_9
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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9917..10819
DNA (903bp) protein (301aa)
Uncharacterized protein Tax=Pedosphaera parvula Ellin514 RepID=B9XGP2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF61093.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
Displaying 9 items

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