ggKbase home page

PLM4_5_b1_sep16_scaffold_2577

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_5_b1_sep16_scaffold_2577_1
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

3..1367
DNA (1365bp) protein (455aa)
Cytochrome b subunit of formate dehydrogenase Tax=Holophaga foetida DSM 6591 RepID=H1NYI2_9BACT
cytochrome b subunit of formate dehydrogenase-like
Cytochrome b subunit of formate dehydrogenase-like protein {ECO:0000313|EMBL:ABF41714.1}; Flags: Precursor;; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
PLM4_5_b1_sep16_scaffold_2577_2
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

1518..2300
DNA (783bp) protein (261aa)
Uncharacterized protein Tax=Pedosphaera parvula Ellin514 RepID=B9XIY0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF60207.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
PLM4_5_b1_sep16_scaffold_2577_3
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(2388..3626)
DNA (1239bp) protein (413aa)
Uncharacterized protein Tax=Pedosphaera parvula Ellin514 RepID=B9XS43_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF57339.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
PLM4_5_b1_sep16_scaffold_2577_4
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3681..4346)
DNA (666bp) protein (222aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00038111B2
Uncharacterized protein {ECO:0000313|EMBL:KFC64634.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
PLM4_5_b1_sep16_scaffold_2577_5
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(4358..5626)
DNA (1269bp) protein (423aa)
Gamma-glutamyl phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00217838}; Short=GPR {ECO:0000256|HAMAP-Rule:MF_00412};; EC=1.2.1.41 {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00217866};; Glutamate-5-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; Glutamyl-gamma-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Gamma-glutamyl phosphate reductase Tax=Pedosphaera parvula Ellin514 RepID=B9X9N4_9BACT
gamma-glutamyl phosphate reductase
PLM4_5_b1_sep16_scaffold_2577_6
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

Not on your lists

comp(5705..6985)
DNA (1281bp) protein (427aa)
amino-acid N-acetyltransferase (EC:2.3.1.1)
Amino-acid N-acetyltransferase Tax=Pedosphaera parvula Ellin514 RepID=B9XDU0_9BACT
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
PLM4_5_b1_sep16_scaffold_2577_7
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(7138..7794)
DNA (657bp) protein (219aa)
Uncharacterized protein Tax=Pedosphaera parvula Ellin514 RepID=B9XQ41_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF58045.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
PLM4_5_b1_sep16_scaffold_2577_8
uncultured Syntrophus sp., Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7881..8246)
DNA (366bp) protein (122aa)
Putative uncharacterized protein (Fragment) Tax=uncultured microorganism RepID=F8UI18_9ZZZZ
CAZy families PL1 protein {ECO:0000313|EMBL:AIA83713.1}; Flags: Fragment;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Syntrophus; environmental samples.;" source="uncultured Syntrophus sp.;"
hypothetical protein
PLM4_5_b1_sep16_scaffold_2577_9
RBG_13_Planctomycetes_63_9_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(8212..12894)
DNA (4683bp) protein (1561aa)
Uncharacterized protein Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I3F3_CALAS
hypothetical protein
Tax=RBG_13_Planctomycetes_63_9_curated
PLM4_5_b1_sep16_scaffold_2577_10
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(13113..14210)
DNA (1098bp) protein (366aa)
Histidinol-phosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01023}; EC=2.6.1.9 {ECO:0000256|HAMAP-Rule:MF_01023};; Imidazole acetol-phosphate transaminase {ECO:0000256|HAMAP-Rule:MF_01023}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Histidinol-phosphate aminotransferase Tax=Pedosphaera parvula Ellin514 RepID=B9XDT9_9BACT
histidinol-phosphate aminotransferase
PLM4_5_b1_sep16_scaffold_2577_11
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(14222..14455)
DNA (234bp) protein (78aa)
Phosphate acetyltransferase {ECO:0000313|EMBL:EEF61828.1}; EC=2.3.1.8 {ECO:0000313|EMBL:EEF61828.1};; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Phosphate acetyltransferase Tax=Pedosphaera parvula Ellin514 RepID=B9XDT7_9BACT
phosphotransacetylase
PLM4_5_b1_sep16_scaffold_2577_12
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(14440..15252)
DNA (813bp) protein (271aa)
Phosphate acetyltransferase {ECO:0000313|EMBL:EEF61828.1}; EC=2.3.1.8 {ECO:0000313|EMBL:EEF61828.1};; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Phosphate acetyltransferase Tax=Pedosphaera parvula Ellin514 RepID=B9XDT7_9BACT
phosphotransacetylase
PLM4_5_b1_sep16_scaffold_2577_13

Not on your lists

comp(16075..16491)
DNA (417bp) protein (139aa)
Uncharacterized protein {ECO:0000313|EMBL:KKN72927.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
PLM4_5_b1_sep16_scaffold_2577_14
GWF2_Bacteroidetes_43_63_curated, Bacteroidetes, Bacteria

Not on your lists

comp(16580..20833)
DNA (4254bp) protein (1418aa)
hypothetical protein
Putative uncharacterized protein bin=GWE2_Bacteroidetes_42_42 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWE2_Bacteroidetes_42_42 organism_group=Bacteroidetes organism_desc=Good +
Tax=GWF2_Bacteroidetes_43_63_curated
Displaying 14 items

View Taxonomy