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PLM4_5_b1_sep16_scaffold_2636

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_5_b1_sep16_scaffold_2636_1
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(2..646)
DNA (645bp) protein (215aa)
Sulfotransferase Tax=Pedosphaera parvula Ellin514 RepID=B9XA43_9BACT
Sulfotransferase {ECO:0000313|EMBL:EEF63384.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
glycosyl transferase family protein
PLM4_5_b1_sep16_scaffold_2636_2
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(913..1188)
DNA (276bp) protein (92aa)
Immunoglobulin I-set domain protein Tax=Pedosphaera parvula Ellin514 RepID=B9XA44_9BACT
Immunoglobulin I-set domain protein {ECO:0000313|EMBL:EEF63385.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
PLM4_5_b1_sep16_scaffold_2636_3
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(1155..1931)
DNA (777bp) protein (259aa)
Immunoglobulin I-set domain protein Tax=Pedosphaera parvula Ellin514 RepID=B9XA44_9BACT
Immunoglobulin I-set domain protein {ECO:0000313|EMBL:EEF63385.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
PLM4_5_b1_sep16_scaffold_2636_4
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(1904..4378)
DNA (2475bp) protein (825aa)
Immunoglobulin I-set domain protein Tax=Pedosphaera parvula Ellin514 RepID=B9XA44_9BACT
Immunoglobulin I-set domain protein {ECO:0000313|EMBL:EEF63385.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
PLM4_5_b1_sep16_scaffold_2636_5
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(4693..5865)
DNA (1173bp) protein (391aa)
Immunoglobulin I-set domain protein (Fragment) Tax=Pedosphaera parvula Ellin514 RepID=B9XSD5_9BACT
Immunoglobulin I-set domain protein {ECO:0000313|EMBL:EEF57235.1}; Flags: Fragment;; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
PLM4_5_b1_sep16_scaffold_2636_6
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(5820..8489)
DNA (2670bp) protein (890aa)
LamG domain protein jellyroll fold domain protein Tax=Pedosphaera parvula Ellin514 RepID=B9XR24_9BACT
LamG domain protein jellyroll fold domain protein {ECO:0000313|EMBL:EEF57720.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
PA14 domain-containing protein
PLM4_5_b1_sep16_scaffold_2636_7
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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8967..10535
DNA (1569bp) protein (523aa)
Predicted TIM-barrel fold metal-dependent hydrolase {ECO:0000313|EMBL:CDM64314.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Putative metal-dependent hydrolase; K07047 bin=RBG_16_Aminicenantes_63_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_16_Aminicenantes_63_14 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
Amidohydrolase 3
PLM4_5_b1_sep16_scaffold_2636_8
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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10541..10801
DNA (261bp) protein (87aa)
Uncharacterized protein Tax=Pedosphaera parvula Ellin514 RepID=B9XJZ0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF59813.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
PLM4_5_b1_sep16_scaffold_2636_9
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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10913..11968
DNA (1056bp) protein (352aa)
DNA-directed DNA polymerase {ECO:0000313|EMBL:EEF62445.1}; EC=2.7.7.7 {ECO:0000313|EMBL:EEF62445.1};; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
DNA-directed DNA polymerase Tax=Pedosphaera parvula Ellin514 RepID=B9XBX7_9BACT
DNA polymerase III, delta' subunit
PLM4_5_b1_sep16_scaffold_2636_10
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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11975..13417
DNA (1443bp) protein (481aa)
O-antigen polymerase Tax=Pedosphaera parvula Ellin514 RepID=B9XBX6_9BACT
O-antigen polymerase {ECO:0000313|EMBL:EEF62444.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
PLM4_5_b1_sep16_scaffold_2636_11
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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13430..13882
DNA (453bp) protein (151aa)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00169};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752};; Type II DHQase {ECO:0000256|HAMAP-Rule:MF_00169}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
aroQ; 3-dehydroquinate dehydratase (EC:4.2.1.10)
3-dehydroquinate dehydratase Tax=Pedosphaera parvula Ellin514 RepID=B9XBX5_9BACT
PLM4_5_b1_sep16_scaffold_2636_12
unknown

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comp(14095..14175)
DNA (81bp) protein (27aa)

This feature has no annotations

Displaying 12 items

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