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PLM4_5_b1_sep16_scaffold_2701

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_5_b1_sep16_scaffold_2701_1
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(129..617)
DNA (489bp) protein (163aa)
Putative PTS IIA-like nitrogen-regulatory protein PtsN Tax=Pedosphaera parvula Ellin514 RepID=B9XR60_9BACT
Putative PTS IIA-like nitrogen-regulatory protein PtsN {ECO:0000313|EMBL:EEF57673.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
PTS system, fructose-specific IIABC component
PLM4_5_b1_sep16_scaffold_2701_2
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria

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comp(610..987)
DNA (378bp) protein (126aa)
Uncharacterized protein Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZR74_OPITP
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
PLM4_5_b1_sep16_scaffold_2701_3
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

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comp(1170..1931)
DNA (762bp) protein (254aa)
Two component, sigma54 specific, transcriptional regulator, Fis family Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZR73_OPITP
two component, sigma54 specific, Fis family transcriptional regulator
Two component, sigma54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:ACB74563.1}; species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
PLM4_5_b1_sep16_scaffold_2701_4
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria

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comp(1928..2416)
DNA (489bp) protein (163aa)
Two component, sigma54 specific, transcriptional regulator, Fis family Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZR73_OPITP
two component, sigma54 specific, Fis family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
PLM4_5_b1_sep16_scaffold_2701_5
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria

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comp(2409..3107)
DNA (699bp) protein (233aa)
Histidine kinase Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZR72_OPITP
histidine kinase
Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
PLM4_5_b1_sep16_scaffold_2701_6
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

3868..6930
DNA (3063bp) protein (1021aa)
Conserved repeat domain protein Tax=Pedosphaera parvula Ellin514 RepID=B9XRL3_9BACT
Immunoglobulin I-set domain protein {ECO:0000313|EMBL:EEF57524.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
PLM4_5_b1_sep16_scaffold_2701_7
RBG_13_Planctomycetes_62_9_curated, Phycisphaerae, Planctomycetes, Bacteria

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7113..8120
DNA (1008bp) protein (336aa)
hypothetical protein Tax=Hydrogenedentes bacterium JGI 0000039-J10 RepID=UPI00035E378C
Tax=RBG_13_Planctomycetes_62_9_curated
PLM4_5_b1_sep16_scaffold_2701_8
unknown

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comp(8150..8674)
DNA (525bp) protein (175aa)

This feature has no annotations

PLM4_5_b1_sep16_scaffold_2701_9
unknown

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comp(8732..9505)
DNA (774bp) protein (258aa)

This feature has no annotations

PLM4_5_b1_sep16_scaffold_2701_10
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

10442..11989
DNA (1548bp) protein (516aa)
Radical SAM domain protein Tax=Pedosphaera parvula Ellin514 RepID=B9XN85_9BACT
Radical SAM domain protein {ECO:0000313|EMBL:EEF58747.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
radical SAM protein
PLM4_5_b1_sep16_scaffold_2701_11
Candidatus Scalindua brodae, Candidatus Scalindua, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

12106..12264
DNA (159bp) protein (53aa)
Uncharacterized protein Tax=Chthoniobacter flavus Ellin428 RepID=B4DA99_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KHE93070.1}; species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Scalindua.;" source="Candidatus Scalindua brodae.;"
PLM4_5_b1_sep16_scaffold_2701_12
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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12213..12764
DNA (552bp) protein (184aa)
hypothetical protein Tax=Methylomonas sp. MK1 RepID=UPI00035CC3A6
glyoxalase/bleomycin resistance protein/dioxygenase
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:ABJ84308.1}; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
PLM4_5_b1_sep16_scaffold_2701_13
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

13070..14434
DNA (1365bp) protein (455aa)
Uncharacterized protein Tax=Chthoniobacter flavus Ellin428 RepID=B4D904_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY17049.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
Displaying 13 items

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