ggKbase home page

PLM4_5_b1_sep16_scaffold_16892

Search features with annotation key words

Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_5_b1_sep16_scaffold_16892_1
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(3..272)
DNA (270bp) protein (90aa)
Uncharacterized protein Tax=Pedosphaera parvula Ellin514 RepID=B9XQ35_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF58039.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
PLM4_5_b1_sep16_scaffold_16892_2
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(288..911)
DNA (624bp) protein (208aa)
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Pedosphaera parvula Ellin514 RepID=B9XQ34_9BACT
sigma-70 family RNA polymerase sigma factor
Tax=GWF2_Verrucomicrobia_62_7_curated
PLM4_5_b1_sep16_scaffold_16892_3
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

1002..1628
DNA (627bp) protein (209aa)
id=4489619 bin=GWF2_Lentisphaerae_50_93 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
Tax=GWF2_Lentisphaerae_50_93_curated
PLM4_5_b1_sep16_scaffold_16892_4
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

Not on your lists

1714..2685
DNA (972bp) protein (324aa)
serine-type D-Ala-D-Ala carboxypeptidase (EC:3.4.16.4)
Serine-type D-Ala-D-Ala carboxypeptidase bin=GWF2_Lentisphaerae_57_35 species=Diplosphaera colitermitum genus=Diplosphaera taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
Tax=GWF2_Lentisphaerae_57_35_curated
PLM4_5_b1_sep16_scaffold_16892_5
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

2794..3183
DNA (390bp) protein (130aa)
Bifunctional uridylyltransferase/uridylyl-removing enzyme Tax=Pedosphaera parvula Ellin514 RepID=B9XPW9_9BACT
Bifunctional uridylyltransferase/uridylyl-removing enzyme {ECO:0000256|HAMAP-Rule:MF_00277, ECO:0000256|SAAS:SAAS00049024}; Short=UTase/UR {ECO:0000256|HAMAP-Rule:MF_00277};; Bifunctional [protein-PII] modification enzyme {ECO:0000256|HAMAP-Rule:MF_00277}; Bifunctional nitrogen sensor protein {ECO:0000256|HAMAP-Rule:MF_00277}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
UTP-GlnB uridylyltransferase, GlnD
Displaying 5 items

View Taxonomy