ggKbase home page

PLM4_5_b1_sep16_scaffold_21980

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_5_b1_sep16_scaffold_21980_1
Herbaspirillum sp. YR522, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..297)
DNA (297bp) protein (99aa)
Chemotaxis signal transduction protein Tax=Herbaspirillum sp. YR522 RepID=J3HRF5_9BURK
Chemotaxis signal transduction protein {ECO:0000313|EMBL:EJN03561.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. YR522.;"
cheW2; chemotaxis protein CheW
PLM4_5_b1_sep16_scaffold_21980_2
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(314..1330)
DNA (1017bp) protein (339aa)
Methyl-accepting chemotaxis sensory transducer Tax=Pedosphaera parvula Ellin514 RepID=B9XNN7_9BACT
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:EEF58577.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
chemotaxis sensory transducer
PLM4_5_b1_sep16_scaffold_21980_3
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(2079..3767)
DNA (1689bp) protein (563aa)
Organic solvent tolerance protein Tax=Pedosphaera parvula Ellin514 RepID=B9XKW6_9BACT
Organic solvent tolerance protein {ECO:0000313|EMBL:EEF59460.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
PLM4_5_b1_sep16_scaffold_21980_4
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(3710..4306)
DNA (597bp) protein (199aa)
Organic solvent tolerance protein Tax=Pedosphaera parvula Ellin514 RepID=B9XKW6_9BACT
Organic solvent tolerance protein {ECO:0000313|EMBL:EEF59460.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
PLM4_5_b1_sep16_scaffold_21980_5
unknown

Not on your lists

4399..4632
DNA (234bp) protein (78aa)

This feature has no annotations

PLM4_5_b1_sep16_scaffold_21980_6
RBG_19FT_COMBO_Chloroflexi_47_9_curated, Chloroflexi, Bacteria

Not on your lists

comp(4690..5310)
DNA (621bp) protein (207aa)
hypothetical protein
Hypothetical conserved protein bin=GWB2_Chloroflexi_49_20 species=uncultured Chloroflexi bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=GWB2_Chloroflexi_49_20 organism_group=Chloroflexi organism_desc=Good
Tax=RBG_19FT_COMBO_Chloroflexi_47_9_curated
PLM4_5_b1_sep16_scaffold_21980_7
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

5488..5973
DNA (486bp) protein (162aa)
putative D-beta-D-heptose 1-phosphate adenylyltransferase (EC:2.7.7.-)
Cytidyltransferase-related domain protein Tax=Pedosphaera parvula Ellin514 RepID=B9XIN8_9BACT
Cytidyltransferase-related domain protein {ECO:0000313|EMBL:EEF60301.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
PLM4_5_b1_sep16_scaffold_21980_8
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

5994..7139
DNA (1146bp) protein (382aa)
Glycosyl transferase group 1 Tax=Pedosphaera parvula Ellin514 RepID=B9XIP0_9BACT
Glycosyl transferase group 1 {ECO:0000313|EMBL:EEF60303.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
glycosyl transferase
PLM4_5_b1_sep16_scaffold_21980_9
unknown

Not on your lists

comp(7312..7839)
DNA (528bp) protein (176aa)

This feature has no annotations

PLM4_5_b1_sep16_scaffold_21980_10
Verrucomicrobia bacterium IMCC26134, Verrucomicrobia, Bacteria

Not on your lists

8101..9024
DNA (924bp) protein (308aa)
hypothetical protein Tax=Rubritalea marina RepID=UPI00037E3C14
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKC82320.1}; species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia.;" source="Verrucomicrobia bacterium IMCC26134.;"
Displaying 10 items

View Taxonomy