ggKbase home page

PLM4_5_b1_sep16_scaffold_6656

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_5_b1_sep16_scaffold_6656_1
unknown

Not on your lists

comp(873..1160)
DNA (288bp) protein (96aa)

This feature has no annotations

PLM4_5_b1_sep16_scaffold_6656_2
RifOxyA12_full_Lentisphaerae_48_11_curated, Lentisphaerae, Bacteria

Not on your lists

1372..1935
DNA (564bp) protein (188aa)
alpha-N-arabinofuranosidase (EC:3.2.1.55)
Alpha-N-arabinofuranosidase Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZRF8_OPITP
Tax=RifOxyA12_full_Lentisphaerae_48_11_curated
PLM4_5_b1_sep16_scaffold_6656_3
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

1935..3206
DNA (1272bp) protein (424aa)
alpha-N-arabinofuranosidase (EC:3.2.1.55)
Alpha-L-arabinofuranosidase domain protein bin=CD_OP8_4m species=Odoribacter splanchnicus genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
Tax=RBG_16_Planctomycetes_55_9_curated
PLM4_5_b1_sep16_scaffold_6656_4
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

3384..4640
DNA (1257bp) protein (419aa)
Proteinase inhibitor I4 serpin bin=GWF2_Lentisphaerae_57_35 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
proteinase inhibitor I4 serpin
Tax=GWF2_Verrucomicrobia_62_7_curated
PLM4_5_b1_sep16_scaffold_6656_5
unknown

Not on your lists

4832..5518
DNA (687bp) protein (229aa)

This feature has no annotations

PLM4_5_b1_sep16_scaffold_6656_6
unknown

Not on your lists

6587..6796
DNA (210bp) protein (70aa)

This feature has no annotations

PLM4_5_b1_sep16_scaffold_6656_7
RBG_13_Planctomycetes_62_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(6807..7076)
DNA (270bp) protein (90aa)
hypothetical protein Tax=Segetibacter koreensis RepID=UPI000367AAFC
NIPSNAP family containing protein
Tax=RBG_13_Planctomycetes_62_9_curated
PLM4_5_b1_sep16_scaffold_6656_8
RBG_13_Planctomycetes_62_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(7069..7350)
DNA (282bp) protein (94aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000371BB08
NIPSNAP family containing protein
Tax=RBG_13_Planctomycetes_62_9_curated
PLM4_5_b1_sep16_scaffold_6656_9
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

7373..8953
DNA (1581bp) protein (527aa)
Efflux transporter, RND family, MFP subunit Tax=Pedosphaera parvula Ellin514 RepID=B9XJL3_9BACT
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EEF59889.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
RND family efflux transporter MFP subunit
PLM4_5_b1_sep16_scaffold_6656_10
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

8966..9727
DNA (762bp) protein (254aa)
ABC transporter-related protein Tax=Chthoniobacter flavus Ellin428 RepID=B4D7Y2_9BACT
ABC transporter-like protein
ABC transporter-related protein {ECO:0000313|EMBL:EDY17505.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
PLM4_5_b1_sep16_scaffold_6656_11
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

9724..10941
DNA (1218bp) protein (406aa)
Uncharacterized protein Tax=Chthoniobacter flavus Ellin428 RepID=B4D7Y3_9BACT
hypothetical protein
Tax=GWF2_Verrucomicrobia_62_7_curated
PLM4_5_b1_sep16_scaffold_6656_12
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(11177..11908)
DNA (732bp) protein (244aa)
Uncharacterized protein Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KXH1_METHD
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
PLM4_5_b1_sep16_scaffold_6656_13
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(12153..14363)
DNA (2211bp) protein (737aa)
Serine/threonine protein kinase Tax=Pedosphaera parvula Ellin514 RepID=B9XAQ6_9BACT
Serine/threonine protein kinase {ECO:0000313|EMBL:EEF63091.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
serine/threonine protein kinase
PLM4_5_b1_sep16_scaffold_6656_14
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

Not on your lists

comp(14416..15174)
DNA (759bp) protein (253aa)
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Pedosphaera parvula Ellin514 RepID=B9XQ22_9BACT
hypothetical protein
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
PLM4_5_b1_sep16_scaffold_6656_15
unknown

Not on your lists

15345..15545
DNA (201bp) protein (67aa)

This feature has no annotations

Displaying 15 items

View Taxonomy