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PLM4_5_b1_sep16_scaffold_922

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_5_b1_sep16_scaffold_922_1
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

2..1399
DNA (1398bp) protein (466aa)
hypothetical protein Tax=Verrucomicrobium spinosum RepID=UPI0001746360
Uncharacterized protein {ECO:0000313|EMBL:EDY22052.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
PLM4_5_b1_sep16_scaffold_922_2
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1401..2318
DNA (918bp) protein (306aa)
Transglutaminase-like enzyme, predicted cysteine protease Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QJ92_AZOSU
transglutaminase
Transglutaminase-like enzyme, predicted cysteine protease {ECO:0000313|EMBL:AEV27561.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) (Dechlorosoma; suillum).;"
PLM4_5_b1_sep16_scaffold_922_3
unknown

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comp(2457..2930)
DNA (474bp) protein (158aa)

This feature has no annotations

PLM4_5_b1_sep16_scaffold_922_4
Candidatus Brocadia sinica, Candidatus Brocadia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(3338..3979)
DNA (642bp) protein (214aa)
Uncharacterized protein {ECO:0000313|EMBL:GAN32026.1}; species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Brocadia.;" source="Candidatus Brocadia sinica JPN1.;"
Uncharacterized protein bin=GWC2_Geobacteraceae_55_20 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Geobacteraceae_55_20 organism_group=Deltaproteobacteria
hypothetical protein
PLM4_5_b1_sep16_scaffold_922_5
Caldithrix abyssi, Caldithrix, Bacteria

Not on your lists

4301..5626
DNA (1326bp) protein (442aa)
Peptidase S8 and S53 subtilisin kexin sedolisin Tax=Caldithrix abyssi DSM 13497 RepID=H1XVI9_9BACT
Peptidase S8 and S53 subtilisin kexin sedolisin {ECO:0000313|EMBL:EHO42889.1}; Flags: Precursor;; species="Bacteria; Caldithrix.;" source="Caldithrix abyssi DSM 13497.;"
subtilin related serine protease
PLM4_5_b1_sep16_scaffold_922_6
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

Not on your lists

5901..6446
DNA (546bp) protein (182aa)
RNA polymerase, sigma-24 subunit, ECF subfamily (Fragment) Tax=Pedosphaera parvula Ellin514 RepID=B9XIS9_9BACT
hypothetical protein
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
PLM4_5_b1_sep16_scaffold_922_7
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

6466..6663
DNA (198bp) protein (66aa)
RNA polymerase, sigma-24 subunit, ECF subfamily (Fragment) Tax=Pedosphaera parvula Ellin514 RepID=B9XIS9_9BACT
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EEF60342.1}; Flags: Fragment;; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
DNA-directed RNA polymerase subunit sigma24
PLM4_5_b1_sep16_scaffold_922_8
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

Not on your lists

6773..9907
DNA (3135bp) protein (1045aa)
pknB; serine/threonine protein kinase (EC:2.7.1.-)
Serine/threonine protein kinase Tax=Rhodopirellula baltica SWK14 RepID=L7CKP2_RHOBT
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
PLM4_5_b1_sep16_scaffold_922_9
Blastopirellula marina, Blastopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

10041..11012
DNA (972bp) protein (324aa)
Probable serine/threonine protein kinase related protein Tax=Blastopirellula marina DSM 3645 RepID=A3ZSG6_9PLAN
Probable serine/threonine protein kinase related protein {ECO:0000313|EMBL:EAQ80626.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Blastopirellula.;" source="Blastopirellula marina DSM 3645.;"
hypothetical protein
PLM4_5_b1_sep16_scaffold_922_10
RBG_19FT_COMBO_Planctomycetes_48_8_curated, Physcisphaerae, Planctomycetes, Bacteria

Not on your lists

10999..11355
DNA (357bp) protein (119aa)
Polyvinylalcohol dehydrogenase Tax=Rhodopirellula europaea 6C RepID=M2AYC0_9PLAN
serine/threonine protein kinase related protein
Tax=RBG_19FT_COMBO_Planctomycetes_48_8_curated
PLM4_5_b1_sep16_scaffold_922_11
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11866..14016
DNA (2151bp) protein (717aa)
Alpha-galactosidase {ECO:0000256|RuleBase:RU361168}; EC=3.2.1.22 {ECO:0000256|RuleBase:RU361168};; Melibiase {ECO:0000256|RuleBase:RU361168}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4).;"
Glycosyl hydrolase family 98 putative carbohydrate binding module Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T4X3_PALPW
glycosyl hydrolase family 98 carbohydrate binding module
PLM4_5_b1_sep16_scaffold_922_12
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(14075..14935)
DNA (861bp) protein (287aa)
OmpA/MotB domain protein Tax=Pedosphaera parvula Ellin514 RepID=B9XER4_9BACT
OmpA/MotB domain protein {ECO:0000313|EMBL:EEF61778.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
OmpA/MotB domain-containing protein
PLM4_5_b1_sep16_scaffold_922_13
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

15126..15944
DNA (819bp) protein (273aa)
Integral membrane protein TerC Tax=Pedosphaera parvula Ellin514 RepID=B9XRJ0_9BACT
Integral membrane protein TerC {ECO:0000313|EMBL:EEF57561.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
integral membrane protein TerC
PLM4_5_b1_sep16_scaffold_922_14
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

16352..17113
DNA (762bp) protein (254aa)
Two component transcriptional regulator, LuxR family Tax=Pedosphaera parvula Ellin514 RepID=B9XA37_9BACT
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:EEF63378.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
LuxR family transcriptional regulator
PLM4_5_b1_sep16_scaffold_922_15
unknown

Not on your lists

17216..17590
DNA (375bp) protein (125aa)

This feature has no annotations

PLM4_5_b1_sep16_scaffold_922_16
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

17571..18815
DNA (1245bp) protein (415aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIE85585.1}; species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
Probable lipoprotein bin=GWC2_Ignavibacteria_56_12 species=Flavobacterium psychrophilum genus=Flavobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
PLM4_5_b1_sep16_scaffold_922_17
unknown

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18828..19166
DNA (339bp) protein (113aa)

This feature has no annotations

PLM4_5_b1_sep16_scaffold_922_18
unknown

Not on your lists

19218..19439
DNA (222bp) protein (74aa)

This feature has no annotations

PLM4_5_b1_sep16_scaffold_922_19
RIFOXYC2_FULL_WOR_2_45_15_curated, WOR-2, Bacteria

Not on your lists

19553..20554
DNA (1002bp) protein (334aa)
Putative uncharacterized protein bin=GWF2_OP3_43_52 species=unknown genus=Methanocaldococcus taxon_order=Methanococcales taxon_class=Methanococci phylum=Euryarchaeota tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
hypothetical protein
Tax=RIFOXYC2_FULL_WOR_2_45_15_curated
PLM4_5_b1_sep16_scaffold_922_20
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

20984..23425
DNA (2442bp) protein (814aa)
Uncharacterized protein Tax=Pedosphaera parvula Ellin514 RepID=B9XHM0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF60598.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
PLM4_5_b1_sep16_scaffold_922_21
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

23594..25897
DNA (2304bp) protein (768aa)
Uncharacterized protein Tax=Pedosphaera parvula Ellin514 RepID=B9XQP3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF57825.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
xylosidase/arabinosidase
PLM4_5_b1_sep16_scaffold_922_22
Bacteroides oleiciplenus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26043..27380
DNA (1338bp) protein (446aa)
Uncharacterized protein Tax=Bacteroides oleiciplenus YIT 12058 RepID=K9DYR1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EKU88391.1}; species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides oleiciplenus YIT 12058.;"
beta-galactosidase
Displaying 22 items

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