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PLM4_5_b1_sep16_scaffold_8464

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_5_b1_sep16_scaffold_8464_1
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(2..1639)
DNA (1638bp) protein (546aa)
Immunoglobulin I-set domain protein Tax=Pedosphaera parvula Ellin514 RepID=B9XFI6_9BACT
Immunoglobulin I-set domain protein {ECO:0000313|EMBL:EEF61350.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
PLM4_5_b1_sep16_scaffold_8464_2
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(1698..2201)
DNA (504bp) protein (168aa)
hypothetical protein Tax=Verrucomicrobia bacterium SCGC AAA164-E04 RepID=UPI0003684734
Uncharacterized protein {ECO:0000313|EMBL:EEF62351.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
prepilin-type N-terminal cleavage/methylation domain
PLM4_5_b1_sep16_scaffold_8464_3
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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2379..3812
DNA (1434bp) protein (478aa)
Putative uncharacterized protein Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5IZE3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KFC58171.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. EM1308.;"
alpha-1,2-mannosidase
PLM4_5_b1_sep16_scaffold_8464_4
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3775..4659
DNA (885bp) protein (295aa)
hypothetical protein Tax=Pedobacter arcticus RepID=UPI0002E8D081
alpha-1,2-mannosidase
Alpha-1,2-mannosidase {ECO:0000313|EMBL:AEV97728.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
PLM4_5_b1_sep16_scaffold_8464_5
RHI_Verrucumicrobia_41_10, Verrucomicrobiae, Verrucomicrobia, Bacteria

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4791..5723
DNA (933bp) protein (311aa)
Uncharacterized protein Tax=Chthoniobacter flavus Ellin428 RepID=B4DA99_9BACT
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated
PLM4_5_b1_sep16_scaffold_8464_6
unknown

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5720..6256
DNA (537bp) protein (179aa)

This feature has no annotations

PLM4_5_b1_sep16_scaffold_8464_7
RBG_13_Planctomycetes_50_24_curated, Physcisphaerae, Planctomycetes, Bacteria

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6214..7455
DNA (1242bp) protein (414aa)
Putative uncharacterized protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01V78_SOLUE
hypothetical protein
Tax=RBG_13_Planctomycetes_50_24_curated
PLM4_5_b1_sep16_scaffold_8464_8
RBG_13_Planctomycetes_50_24_curated, Physcisphaerae, Planctomycetes, Bacteria

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7466..8053
DNA (588bp) protein (196aa)
Tax=RBG_13_Planctomycetes_50_24_curated
PLM4_5_b1_sep16_scaffold_8464_9
CG_Verruco_01, Verrucomicrobia, Bacteria

Not on your lists

8109..8615
DNA (507bp) protein (169aa)
ferroxidase (EC:1.16.3.1)
Ferroxidase Tax=Chloroflexus RepID=A9WDH6_CHLAA
Tax=CG_Verruco_01
PLM4_5_b1_sep16_scaffold_8464_10
RLO_PLX_64_10, Bacteria

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8649..8972
DNA (324bp) protein (108aa)
Probable hydrogenase nickel incorporation protein HypA Tax=Geitlerinema sp. PCC 7407 RepID=K9S9G0_9CYAN
hydrogenase nickel incorporation protein HypA
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PLM4_5_b1_sep16_scaffold_8464_11
Arthrospira sp. PCC 8005, Arthrospira, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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8972..9877
DNA (906bp) protein (302aa)
GTP hydrolase involved in nickel liganding into hydrogenases {ECO:0000313|EMBL:CCE15280.1}; EC=3.-.-.- {ECO:0000313|EMBL:CCE15280.1};; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Arthrospira.;" source="Arthrospira sp. PCC 8005.;"
hypothetical protein Tax=Oscillatoria sp. PCC 10802 RepID=UPI00034DE79E
hypB; hydrogenase accessory protein HypB
PLM4_5_b1_sep16_scaffold_8464_12
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

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comp(9884..10213)
DNA (330bp) protein (110aa)
4Fe-4S ferredoxin iron-sulfur binding domain protein Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B2A057_OPITP
4Fe-4S ferredoxin
4Fe-4S ferredoxin iron-sulfur binding domain protein {ECO:0000313|EMBL:ACB77393.1}; species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
PLM4_5_b1_sep16_scaffold_8464_13
GWF1_Spirochaetes_51_8_curated, Spirochaetes, Bacteria

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comp(10215..11168)
DNA (954bp) protein (318aa)
NADH-ubiquinone oxidoreductase chain 49kDa bin=GWF1_Spirochaetes_51_8 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF1_Spirochaetes_51_8 organism_group=Spirochaetes organism_desc=Novel clade
Energy-conserving hydrogenase (ferredoxin), subunit E
Tax=GWF1_Spirochaetes_51_8_curated
PLM4_5_b1_sep16_scaffold_8464_14
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(11175..11633)
DNA (459bp) protein (153aa)
Uncharacterized protein Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B2A055_OPITP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB77391.1}; species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
PLM4_5_b1_sep16_scaffold_8464_15
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(11647..12666)
DNA (1020bp) protein (340aa)
NADH ubiquinone oxidoreductase 20 kDa subunit Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B2A054_OPITP
NADH ubiquinone oxidoreductase 20 kDa subunit
NADH ubiquinone oxidoreductase 20 kDa subunit {ECO:0000313|EMBL:ACB77390.1}; species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
PLM4_5_b1_sep16_scaffold_8464_16
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

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comp(12653..13615)
DNA (963bp) protein (321aa)
Respiratory-chain NADH dehydrogenase subunit 1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B2A053_OPITP
respiratory-chain NADH dehydrogenase subunit 1
Respiratory-chain NADH dehydrogenase subunit 1 {ECO:0000313|EMBL:ACB77389.1}; species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
PLM4_5_b1_sep16_scaffold_8464_17
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(13612..14922)
DNA (1311bp) protein (437aa)
NADH dehydrogenase (quinone) (EC:1.6.99.5)
NADH dehydrogenase (Quinone) {ECO:0000313|EMBL:ACB77388.1}; EC=1.6.99.5 {ECO:0000313|EMBL:ACB77388.1};; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
NADH dehydrogenase (Quinone) Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B2A052_OPITP
Displaying 17 items

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