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PLM4_5_b1_sep16_scaffold_5144

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_5_b1_sep16_scaffold_5144_1
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

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comp(2..139)
DNA (138bp) protein (46aa)
Pyruvate phosphate dikinase PEP/pyruvate-binding Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZVL0_OPITP
pyruvate phosphate dikinase
Pyruvate phosphate dikinase PEP/pyruvate-binding {ECO:0000313|EMBL:ACB74107.1}; species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
PLM4_5_b1_sep16_scaffold_5144_2
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

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comp(164..1504)
DNA (1341bp) protein (447aa)
glutamate dehydrogenase (EC:1.4.1.4)
Glutamate dehydrogenase Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZVK9_OPITP
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
PLM4_5_b1_sep16_scaffold_5144_3
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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1714..3255
DNA (1542bp) protein (514aa)
Glucose-6-phosphate 1-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497}; Short=G6PD {ECO:0000256|HAMAP-Rule:MF_00966};; EC=1.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497};; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
glucose-6-phosphate 1-dehydrogenase (EC:1.1.1.49)
Glucose-6-phosphate 1-dehydrogenase Tax=Pedosphaera parvula Ellin514 RepID=B9XC33_9BACT
PLM4_5_b1_sep16_scaffold_5144_4
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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3265..4005
DNA (741bp) protein (247aa)
pgl; 6-phosphogluconolactonase (EC:3.1.1.31)
6-phosphogluconolactonase Tax=Pedosphaera parvula Ellin514 RepID=B9XC32_9BACT
6-phosphogluconolactonase {ECO:0000313|EMBL:EEF62500.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
PLM4_5_b1_sep16_scaffold_5144_5
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(4002..4958)
DNA (957bp) protein (319aa)
Uncharacterized protein Tax=Pedosphaera parvula Ellin514 RepID=B9XC49_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF62517.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
LmbE family protein
PLM4_5_b1_sep16_scaffold_5144_6
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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5118..6338
DNA (1221bp) protein (407aa)
Immunoglobulin I-set domain protein Tax=Pedosphaera parvula Ellin514 RepID=B9XID8_9BACT
Immunoglobulin I-set domain protein {ECO:0000313|EMBL:EEF60399.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
carbohydrate-binding family 6 protein
PLM4_5_b1_sep16_scaffold_5144_7
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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6332..8566
DNA (2235bp) protein (745aa)
Uncharacterized protein Tax=Pedosphaera parvula Ellin514 RepID=B9XMV4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF58879.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
PLM4_5_b1_sep16_scaffold_5144_8
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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8659..11607
DNA (2949bp) protein (983aa)
Two component regulator propeller domain protein Tax=Pedosphaera parvula Ellin514 RepID=B9XDU7_9BACT
Two component regulator propeller domain protein {ECO:0000313|EMBL:EEF61838.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
PLM4_5_b1_sep16_scaffold_5144_9
unknown

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11956..12063
DNA (108bp) protein (36aa)

This feature has no annotations

PLM4_5_b1_sep16_scaffold_5144_10
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria

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12266..13018
DNA (753bp) protein (251aa)
Uncharacterized protein bin=GWB2_Proteobacteria_55_19 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
PLM4_5_b1_sep16_scaffold_5144_11
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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13189..13776
DNA (588bp) protein (196aa)
Two component transcriptional regulator, LuxR family Tax=Pedosphaera parvula Ellin514 RepID=B9XDU8_9BACT
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:EEF61839.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
response regulator receiver
PLM4_5_b1_sep16_scaffold_5144_12
Dictyoglomus thermophilum, Dictyoglomus, Dictyoglomales, Dictyoglomia, Dictyoglomi, Bacteria

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13773..15161
DNA (1389bp) protein (463aa)
Trehalose/maltose binding protein, putative Tax=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) RepID=B5YAH6_DICT6
trehalose/maltose binding protein
Trehalose/maltose binding protein, putative {ECO:0000313|EMBL:ACI19397.1}; species="Bacteria; Dictyoglomi; Dictyoglomales; Dictyoglomaceae; Dictyoglomus.;" source="Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12).;"
PLM4_5_b1_sep16_scaffold_5144_13
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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15425..16717
DNA (1293bp) protein (431aa)
Oxidoreductase domain protein Tax=Pedosphaera parvula Ellin514 RepID=B9XSR5_9BACT
Oxidoreductase domain protein {ECO:0000313|EMBL:EEF57117.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
NADH-dependent dyhydrogenase
PLM4_5_b1_sep16_scaffold_5144_14
unknown

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comp(16979..17071)
DNA (93bp) protein (31aa)

This feature has no annotations

Displaying 14 items

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