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PLM4_5_b1_sep16_scaffold_5580

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_5_b1_sep16_scaffold_5580_1
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(1..183)
DNA (183bp) protein (61aa)
Uncharacterized protein Tax=Pedosphaera parvula Ellin514 RepID=B9XLY9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF59117.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
PLM4_5_b1_sep16_scaffold_5580_2
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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424..1404
DNA (981bp) protein (327aa)
Xylose isomerase domain protein TIM barrel Tax=Chthoniobacter flavus Ellin428 RepID=B4CYV4_9BACT
Xylose isomerase domain protein TIM barrel {ECO:0000313|EMBL:EDY20645.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
PLM4_5_b1_sep16_scaffold_5580_3
uncultured Verrucomicrobia bacterium, Verrucomicrobia, Bacteria

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1407..2162
DNA (756bp) protein (252aa)
Deoxyribose-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256|SAAS:SAAS00058202}; Short=DERA {ECO:0000256|HAMAP-Rule:MF_00114};; EC=4.1.2.4 {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256|SAAS:SAAS00058202};; 2-deoxy-D-ribose 5-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114}; Phosphodeoxyriboaldolase {ECO:0000256|HAMAP-Rule:MF_00114}; species="Bacteria; Verrucomicrobia; environmental samples.;" source="uncultured Verrucomicrobia bacterium.;"
deoxyribose-phosphate aldolase (EC:4.1.2.4)
Deoxyribose-phosphate aldolase Tax=uncultured Verrucomicrobia bacterium RepID=D2DXU4_9BACT
PLM4_5_b1_sep16_scaffold_5580_4
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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2213..3097
DNA (885bp) protein (295aa)
Oxidoreductase domain protein Tax=Pedosphaera parvula Ellin514 RepID=B9XK65_9BACT
Oxidoreductase domain protein {ECO:0000313|EMBL:EEF59703.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
oxidoreductase domain-containing protein
PLM4_5_b1_sep16_scaffold_5580_5
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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3052..3363
DNA (312bp) protein (104aa)
Oxidoreductase domain protein Tax=Pedosphaera parvula Ellin514 RepID=B9XK65_9BACT
Oxidoreductase domain protein {ECO:0000313|EMBL:EEF59703.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
oxidoreductase domain-containing protein
PLM4_5_b1_sep16_scaffold_5580_6
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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3422..4294
DNA (873bp) protein (291aa)
Uncharacterized protein Tax=Pedosphaera parvula Ellin514 RepID=B9XCN5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF62231.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
PLM4_5_b1_sep16_scaffold_5580_7
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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4315..5019
DNA (705bp) protein (235aa)
Guanylate kinase {ECO:0000256|SAAS:SAAS00021750}; EC=2.7.4.8 {ECO:0000256|SAAS:SAAS00036702};; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Guanylate kinase Tax=Pedosphaera parvula Ellin514 RepID=B9XCN6_9BACT
guanylate kinase
PLM4_5_b1_sep16_scaffold_5580_8
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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5027..5569
DNA (543bp) protein (181aa)
Phosphopantothenoylcysteine decarboxylase {ECO:0000313|EMBL:EEF60936.1}; EC=4.1.1.36 {ECO:0000313|EMBL:EEF60936.1};; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Phosphopantothenoylcysteine decarboxylase Tax=Pedosphaera parvula Ellin514 RepID=B9XH15_9BACT
phosphopantothenate--cysteine ligase
PLM4_5_b1_sep16_scaffold_5580_9
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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5596..7044
DNA (1449bp) protein (483aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein Tax=unclassified Verrucomicrobia (miscellaneous) RepID=UPI000380392E
histidine kinase
PLM4_5_b1_sep16_scaffold_5580_10
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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7046..8476
DNA (1431bp) protein (477aa)
hypothetical protein Tax=unclassified Verrucomicrobia (miscellaneous) RepID=UPI00037F33C6
Putative two component, sigma54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:EEF60934.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
two component sigma54 specific Fis family transcriptional regulator
PLM4_5_b1_sep16_scaffold_5580_11
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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8851..9558
DNA (708bp) protein (236aa)
squalene synthase (EC:2.5.1.32)
Squalene synthase HpnD Tax=Pedosphaera parvula Ellin514 RepID=B9XH10_9BACT
Squalene synthase HpnD {ECO:0000313|EMBL:EEF60931.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Displaying 11 items

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