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PLM4_5_b1_sep16_scaffold_5717

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_5_b1_sep16_scaffold_5717_1
Cellvibrio japonicus, Cellvibrio, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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421..2478
DNA (2058bp) protein (686aa)
cel5G; cellulase (EC:3.2.1.4)
Cellulase, putative, cel5G {ECO:0000313|EMBL:ACE83242.1}; EC=3.2.1.4 {ECO:0000313|EMBL:ACE83242.1};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Cellvibrio.;" source="Cellvibrio japonicus (strain Ueda107) (Pseudomonas fluorescens subsp.; cellulosa).;"
Cellulase, putative, cel5G Tax=Cellvibrio japonicus (strain Ueda107) RepID=B3PBJ3_CELJU
PLM4_5_b1_sep16_scaffold_5717_2
unknown

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comp(2812..3549)
DNA (738bp) protein (246aa)

This feature has no annotations

PLM4_5_b1_sep16_scaffold_5717_3
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

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comp(3584..4291)
DNA (708bp) protein (236aa)
Putative uncharacterized protein Tax=Opitutaceae bacterium TAV5 RepID=H1IU16_9BACT
hypothetical protein
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
PLM4_5_b1_sep16_scaffold_5717_4
GWC2_Nitrospirae_42_7_curated, Nitrospirae, Bacteria

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4429..5076
DNA (648bp) protein (216aa)
id=4667274 bin=GWC2_CP_Nitrospirae-rel_42_7 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
Tax=GWC2_Nitrospirae_42_7_curated
PLM4_5_b1_sep16_scaffold_5717_5
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(5073..6908)
DNA (1836bp) protein (612aa)
hypothetical protein Tax=Spirosoma spitsbergense RepID=UPI00036A2A77
Alpha-L-rhamnosidase {ECO:0000313|EMBL:ETZ23910.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
glycoside hydrolase
PLM4_5_b1_sep16_scaffold_5717_6
RifOxyA12_full_Proteobacteria_58_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(7046..8602)
DNA (1557bp) protein (519aa)
Putative uncharacterized protein Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HEY4_ANADF
hypothetical protein
Tax=RifOxyA12_full_Proteobacteria_58_15_curated
PLM4_5_b1_sep16_scaffold_5717_7
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(8974..9948)
DNA (975bp) protein (325aa)
Metal-dependent hydrolase Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q09D42_STIAD
Metal-dependent hydrolase {ECO:0000313|EMBL:KFE62715.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyalangium minutum.;"
metal-dependent hydrolase
PLM4_5_b1_sep16_scaffold_5717_trna_1
unknown

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comp(10110..10183)
DNA (74bp)
transferRNA Arg
PLM4_5_b1_sep16_scaffold_5717_8
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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10156..11160
DNA (1005bp) protein (335aa)
Formyl transferase domain protein Tax=Pedosphaera parvula Ellin514 RepID=B9XM23_9BACT
Formyl transferase domain protein {ECO:0000313|EMBL:EEF59151.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
purU; formyltetrahydrofolate deformylase
PLM4_5_b1_sep16_scaffold_5717_9
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(11202..12305)
DNA (1104bp) protein (368aa)
mutY; A/G-specific adenine glycosylase MutY (EC:3.2.2.-)
A/G-specific adenine glycosylase Tax=Pedosphaera parvula Ellin514 RepID=B9XFP7_9BACT
A/G-specific adenine glycosylase {ECO:0000313|EMBL:EEF61411.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
PLM4_5_b1_sep16_scaffold_5717_10
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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12349..12723
DNA (375bp) protein (125aa)
Ribonuclease HIII {ECO:0000256|HAMAP-Rule:MF_00053, ECO:0000256|SAAS:SAAS00088219}; Short=RNase HIII {ECO:0000256|HAMAP-Rule:MF_00053};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00053, ECO:0000256|SAAS:SAAS00088223};; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Ribonuclease HIII Tax=Pedosphaera parvula Ellin514 RepID=B9XFP6_9BACT
ribonuclease HIII
PLM4_5_b1_sep16_scaffold_5717_11
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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12732..13331
DNA (600bp) protein (200aa)
Ribonuclease HIII {ECO:0000256|HAMAP-Rule:MF_00053, ECO:0000256|SAAS:SAAS00088219}; Short=RNase HIII {ECO:0000256|HAMAP-Rule:MF_00053};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00053, ECO:0000256|SAAS:SAAS00088223};; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
rnhB_2; ribonuclease HIII (EC:3.1.26.4)
Ribonuclease HIII Tax=Pedosphaera parvula Ellin514 RepID=B9XFP6_9BACT
PLM4_5_b1_sep16_scaffold_5717_12
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

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comp(13411..14247)
DNA (837bp) protein (279aa)
Sugar phosphate isomerases/epimerases bin=RBG_16_Aminicenantes_63_16_plus species=Chthonomonas calidirosea genus=Chthonomonas taxon_order=Chthonomonadales taxon_class=Chthonomonadetes phylum=Armatimonadetes tax=RBG_16_Aminicenantes_63_16_plus organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate Resolve three similar GC_Cov Aminicentantes bins with ESOM
Sugar phosphate isomerases/epimerases
Tax=RBG_16_Planctomycetes_64_12_curated
PLM4_5_b1_sep16_scaffold_5717_13
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(14372..14968)
DNA (597bp) protein (199aa)
TPR repeat-containing protein Tax=Pedosphaera parvula Ellin514 RepID=B9XBT7_9BACT
TPR repeat-containing protein {ECO:0000313|EMBL:EEF62405.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
Displaying 14 items

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