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PLM4_5_b1_sep16_scaffold_5767

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_5_b1_sep16_scaffold_5767_1

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3..533
DNA (531bp) protein (177aa)
Marine sediment metagenome DNA, contig: S01H1_S39825 {ECO:0000313|EMBL:GAG50157.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
PLM4_5_b1_sep16_scaffold_5767_2
unknown

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826..1803
DNA (978bp) protein (326aa)

This feature has no annotations

PLM4_5_b1_sep16_scaffold_5767_3
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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1935..2300
DNA (366bp) protein (122aa)
Transcriptional regulator, BadM/Rrf2 family Tax=Pedosphaera parvula Ellin514 RepID=B9XDK2_9BACT
Transcriptional regulator, BadM/Rrf2 family {ECO:0000313|EMBL:EEF62148.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Rrf2 family transcriptional regulator
PLM4_5_b1_sep16_scaffold_5767_4
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(2345..4399)
DNA (2055bp) protein (685aa)
Uncharacterized protein Tax=Pedosphaera parvula Ellin514 RepID=B9XDK3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF62149.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
PLM4_5_b1_sep16_scaffold_5767_5
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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4633..5286
DNA (654bp) protein (218aa)
Thiamine-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; Short=TP synthase {ECO:0000256|HAMAP-Rule:MF_00097};; Short=TPS {ECO:0000256|HAMAP-Rule:MF_00097};; EC=2.5.1.3 {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826};; Thiamine-phosphate pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
thiamine-phosphate pyrophosphorylase (EC:2.5.1.3)
Thiamine-phosphate synthase Tax=Pedosphaera parvula Ellin514 RepID=B9XQ85_9BACT
PLM4_5_b1_sep16_scaffold_5767_6
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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5356..9504
DNA (4149bp) protein (1383aa)
Putative uncharacterized protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G410_GEOUR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ26528.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_5_b1_sep16_scaffold_5767_7
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(9480..10370)
DNA (891bp) protein (297aa)
Cation diffusion facilitator family transporter Tax=Pedosphaera parvula Ellin514 RepID=B9XCG9_9BACT
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:EEF62637.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
cation diffusion facilitator family transporter
PLM4_5_b1_sep16_scaffold_5767_8
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(10505..11098)
DNA (594bp) protein (198aa)
Dephospho-CoA kinase {ECO:0000256|HAMAP-Rule:MF_00376}; EC=2.7.1.24 {ECO:0000256|HAMAP-Rule:MF_00376};; Dephosphocoenzyme A kinase {ECO:0000256|HAMAP-Rule:MF_00376}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
dephospho-CoA kinase (EC:2.7.1.24)
Dephospho-CoA kinase Tax=Pedosphaera parvula Ellin514 RepID=B9XF05_9BACT
PLM4_5_b1_sep16_scaffold_5767_9
Arthrospira sp. PCC 8005, Arthrospira, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(11162..13267)
DNA (2106bp) protein (702aa)
Putative Subtilisin {ECO:0000313|EMBL:CCE20711.1}; EC=3.4.21.62 {ECO:0000313|EMBL:CCE20711.1};; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Arthrospira.;" source="Arthrospira sp. PCC 8005.;"
hypothetical protein Tax=Verrucomicrobia bacterium SCGC AAA164-N20 RepID=UPI00037662BA
hypothetical protein
Displaying 9 items

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