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PLM4_5_b1_sep16_scaffold_13677

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_5_b1_sep16_scaffold_13677_1
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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1..1308
DNA (1308bp) protein (436aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00252}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
lysS; lysyl-tRNA synthetase (EC:6.1.1.6)
Lysine--tRNA ligase Tax=Pedosphaera parvula Ellin514 RepID=B9XAA4_9BACT
PLM4_5_b1_sep16_scaffold_13677_2
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

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1372..1815
DNA (444bp) protein (148aa)
Glutamine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00126, ECO:0000256|SAAS:SAAS00016670}; EC=6.1.1.18 {ECO:0000256|HAMAP-Rule:MF_00126, ECO:0000256|SAAS:SAAS00023088};; Glutaminyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00126}; species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
Glutamine--tRNA ligase Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZXF6_OPITP
glutaminyl-tRNA synthetase
PLM4_5_b1_sep16_scaffold_13677_3
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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1953..3146
DNA (1194bp) protein (398aa)
Glutamine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00126, ECO:0000256|SAAS:SAAS00016670}; EC=6.1.1.18 {ECO:0000256|HAMAP-Rule:MF_00126, ECO:0000256|SAAS:SAAS00023088};; Glutaminyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00126}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
glutaminyl-tRNA synthetase (EC:6.1.1.18)
Glutamine--tRNA ligase Tax=Chthoniobacter flavus Ellin428 RepID=B4D9B1_9BACT
PLM4_5_b1_sep16_scaffold_13677_4
RBG_13_Bacteroidetes_46_8_curated, Bacteroidia, Bacteroidetes, Bacteria

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3502..5910
DNA (2409bp) protein (803aa)
Uncharacterized protein Tax=Parabacteroides sp. CAG:409 RepID=R7JDM8_9PORP
alkyl hydroperoxide reductase
Tax=RBG_13_Bacteroidetes_46_8_curated
PLM4_5_b1_sep16_scaffold_13677_5
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(5807..6361)
DNA (555bp) protein (185aa)
Peptidase M56 BlaR1 (Fragment) Tax=Pedosphaera parvula Ellin514 RepID=B9XS75_9BACT
Peptidase M56 BlaR1 {ECO:0000313|EMBL:EEF57330.1}; Flags: Precursor; Fragment;; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
PLM4_5_b1_sep16_scaffold_13677_6
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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6718..7623
DNA (906bp) protein (302aa)
Uncharacterized protein Tax=Pedosphaera parvula Ellin514 RepID=B9XEG7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF61681.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
PLM4_5_b1_sep16_scaffold_13677_7
RLO_PLX_64_10, Bacteria

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comp(7630..8871)
DNA (1242bp) protein (414aa)
hypothetical protein Tax=Verrucomicrobia bacterium SCGC AAA164-E04 RepID=UPI000372B8C1
hydrolase
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PLM4_5_b1_sep16_scaffold_13677_8
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(9440..10051)
DNA (612bp) protein (204aa)
Colicin V production protein Tax=Pedosphaera parvula Ellin514 RepID=B9XFW5_9BACT
Colicin V production protein {ECO:0000313|EMBL:EEF61127.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
PLM4_5_b1_sep16_scaffold_13677_9
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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10377..11432
DNA (1056bp) protein (352aa)
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Pedosphaera parvula Ellin514 RepID=B9XBJ5_9BACT
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EEF62880.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
ECF subfamily RNA polymerase sigma-24 factor
Displaying 9 items

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