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PLM4_5_b1_sep16_scaffold_20132

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_5_b1_sep16_scaffold_20132_1
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(2..589)
DNA (588bp) protein (196aa)
Lipid-A-disaccharide synthase {ECO:0000313|EMBL:EEF57669.1}; EC=2.4.1.182 {ECO:0000313|EMBL:EEF57669.1};; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Lipid-A-disaccharide synthase Tax=Pedosphaera parvula Ellin514 RepID=B9XR56_9BACT
lpxB; Lipid A disaccharide synthetase
PLM4_5_b1_sep16_scaffold_20132_2
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(604..1689)
DNA (1086bp) protein (362aa)
Oxidoreductase domain protein Tax=Pedosphaera parvula Ellin514 RepID=B9XR54_9BACT
Oxidoreductase domain protein {ECO:0000313|EMBL:EEF57667.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
oxidoreductase
PLM4_5_b1_sep16_scaffold_20132_3
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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1760..2425
DNA (666bp) protein (222aa)
Glycerol-3-phosphate acyltransferase Tax=Pedosphaera parvula Ellin514 RepID=B9XR53_9BACT
Glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-PO4 G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-phosphate--glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Lysophosphatidic acid synthase {ECO:0000256|HAMAP-Rule:MF_01043}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
membrane protein
PLM4_5_b1_sep16_scaffold_20132_4
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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2731..3417
DNA (687bp) protein (229aa)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] {ECO:0000256|HAMAP-Rule:MF_00394}; EC=1.1.1.94 {ECO:0000256|HAMAP-Rule:MF_00394};; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00394}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Glycerol-3-phosphate dehydrogenase [NAD(P)+] Tax=Pedosphaera parvula Ellin514 RepID=B9XR52_9BACT
NAD(P)H-dependent glycerol-3-phosphate dehydrogenase
PLM4_5_b1_sep16_scaffold_20132_5
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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3528..3905
DNA (378bp) protein (126aa)
Ferredoxin, 2Fe-2S Tax=Pedosphaera parvula Ellin514 RepID=B9XL37_9BACT
Ferredoxin, 2Fe-2S {ECO:0000313|EMBL:EEF59388.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
(2Fe-2S) ferredoxin
PLM4_5_b1_sep16_scaffold_20132_6
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3912..4424)
DNA (513bp) protein (171aa)
thrH; phosphoserine phosphatase (EC:2.7.1.39 2.7.1.- 3.1.3.3)
Phosphoserine phosphatase {ECO:0000313|EMBL:AAZ44816.1}; EC=3.1.3.3 {ECO:0000313|EMBL:AAZ44816.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
Phosphoserine phosphatase Tax=Dechloromonas aromatica (strain RCB) RepID=Q47K15_DECAR
PLM4_5_b1_sep16_scaffold_20132_7
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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4678..5106
DNA (429bp) protein (143aa)
Thioesterase superfamily protein Tax=Pedosphaera parvula Ellin514 RepID=B9XGE9_9BACT
Thioesterase superfamily protein {ECO:0000313|EMBL:EEF61000.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
thioesterase
PLM4_5_b1_sep16_scaffold_20132_8
unknown

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comp(4983..6848)
DNA (1866bp) protein (622aa)

This feature has no annotations

PLM4_5_b1_sep16_scaffold_20132_9
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

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7224..7376
DNA (153bp) protein (51aa)
Oligopeptide transporter, OPT superfamily bin=GWA2_Elusimicrobia_69_24 species=Opitutus terrae genus=Opitutus taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
OPT family oligopeptide transporter
Tax=GWA2_Elusimicrobia_69_24_curated
PLM4_5_b1_sep16_scaffold_20132_10
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

7474..9705
DNA (2232bp) protein (744aa)
1,4-alpha-glucan branching enzyme GlgB {ECO:0000256|HAMAP-Rule:MF_00685}; EC=2.4.1.18 {ECO:0000256|HAMAP-Rule:MF_00685};; 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase {ECO:0000256|HAMAP-Rule:MF_00685}; Alpha-(1->4)-glucan branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; Glycogen branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
1,4-alpha-glucan branching enzyme GlgB Tax=Pedosphaera parvula Ellin514 RepID=B9XF06_9BACT
alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase
PLM4_5_b1_sep16_scaffold_20132_11
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(9695..9886)
DNA (192bp) protein (64aa)
hypothetical protein Tax=Verrucomicrobia bacterium SCGC AAA164-E04 RepID=UPI00037A7E21
Uncharacterized protein {ECO:0000313|EMBL:EEF58335.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Displaying 11 items

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