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PLM4_5_b1_sep16_scaffold_2788_8

Organism: PLM4_5_b1_sep16_Verrucomicrobia_Verrucomicrobiales_60_7

near complete RP 41 / 55 MC: 1 BSCG 42 / 51 ASCG 9 / 38 MC: 1
Location: comp(5984..6781)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase Tax=Pedosphaera parvula Ellin514 RepID=B9XQ50_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 59.9
  • Coverage: 262.0
  • Bit_score: 327
  • Evalue 9.20e-87
Pseudouridine synthase {ECO:0000313|EMBL:EEF58054.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.9
  • Coverage: 262.0
  • Bit_score: 327
  • Evalue 1.30e-86
pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 39.6
  • Coverage: 268.0
  • Bit_score: 162
  • Evalue 1.40e-37

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 798
ATGGCTTTTATCAAGATTTCGCACCCGCCTACCCAGGACTTCTGGGAGATCGAAGTGCTGTTCGAGGATGAGCACCTGTTGGCCTTGAACAAGCCCGGCGGCCTGTTGACTTCGCCCGATCGCGCTGCCCCCGAACGTCCGAGCCTGATGGGTTTAGTCCACAAGTGCATCCAAGAGGGAAAACCCTGGACTGCGGAGCGCAGCTTGGGTTACCTCATCAACGCCCATCGCCTGGACCACGAAACCAGCGGCGTCCTGCTTTTGGCAAAGAGCAAGCCCGTGCTGGTGGCGCTGGCCGACGTGTTCGGTTCGGAGAAACCCCTAATCAACCTTGTGACCCTGGCTCAAGGCATGCCTGCAGAGGACAAGTTCGAGGTCAACGCCAACCTCGCCCCGCACCCAGCGAAACACGGCCTTGTCCACGTGGACTCAAAGCGGGGCAAACGGTCACGGACGCTTTTCGAGGTGCTCGAGCGCTTTAAAGGCTGGACGCTGATGAAATGCACGCCGCTCACGACCCGCAAGCACCAGGTTCGGGTTCATTTGAAACAAGTCCGCCTGCCCGTGGCGGGCGATACCGATTACGGGGGCGCACGCCTGCTGCTTTCACGGGTGAAGCCCAACTTCTGGCTAAAACCTCAAAAGACGGAAAAGCCCCTTCTGGATCGGCCGACGCTGCACGTCGAGAGTCTGGAAATGCCCCATCCCGTTACCGGGGCACCGCTGCACCTCCAGGCTCCCTGGCCGAAAGATCTGATGGTGGCCGTGAAATACCTGCGGAAATACGCGTCGGTCTAG
PROTEIN sequence
Length: 266
MAFIKISHPPTQDFWEIEVLFEDEHLLALNKPGGLLTSPDRAAPERPSLMGLVHKCIQEGKPWTAERSLGYLINAHRLDHETSGVLLLAKSKPVLVALADVFGSEKPLINLVTLAQGMPAEDKFEVNANLAPHPAKHGLVHVDSKRGKRSRTLFEVLERFKGWTLMKCTPLTTRKHQVRVHLKQVRLPVAGDTDYGGARLLLSRVKPNFWLKPQKTEKPLLDRPTLHVESLEMPHPVTGAPLHLQAPWPKDLMVAVKYLRKYASV*