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PLM4_5_b1_sep16_scaffold_4018_6

Organism: PLM4_5_b1_sep16_Verrucomicrobia_Verrucomicrobiales_60_7

near complete RP 41 / 55 MC: 1 BSCG 42 / 51 ASCG 9 / 38 MC: 1
Location: comp(5078..6490)

Top 3 Functional Annotations

Value Algorithm Source
Hopanoid biosynthesis associated radical SAM protein HpnH Tax=Pedosphaera parvula Ellin514 RepID=B9XKG5_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 79.4
  • Coverage: 471.0
  • Bit_score: 797
  • Evalue 5.60e-228
Hopanoid biosynthesis associated radical SAM protein HpnH {ECO:0000313|EMBL:EEF59635.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.4
  • Coverage: 471.0
  • Bit_score: 797
  • Evalue 7.80e-228
hopanoid biosynthesis associated radical SAM protein HpnH similarity KEGG
DB: KEGG
  • Identity: 43.9
  • Coverage: 264.0
  • Bit_score: 235
  • Evalue 3.10e-59

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1413
ATGCGATTTCCATTCGCTTTGACGGTTAAGATCGCCCGCCACATCATTTCGCACAAGCTGCGGCGCACGCCCAGGTTTGCCATGGTCCTGCAACTGGAGCCGTTGCACACCTGCAATTTGACATGCACCGGGTGCGGTCGTATTCGGGAATACTCCACCAGCCTCAAGGACATGATGTCGCTGGAGGATTGTCTCGGCTCCGCGACCGAGTGCGATGCCCCCATGGTTTCGATTTGCGGTGGTGAACCGCTGATTTACCCGAAGATCAAGGAACTGGTCGACGGCTTGCTGGCGCAGGCGCGTATCGTCTACGTCTGCACGAACGGGATGTTCATGCGCCGGGAGATGAAGGATTATCTGGCCAGCTCCTACACGCCGGCGCTGGAGCCGACGCTCGCCCGATTGCTCTCTGAGAAACTGATTTCCGATAAAGACGTTGAGACCATCCGAAAGGGCCCGAAAGACCAGCGCCCGCCCATCAAGCCCAGCCAGTGGATCTACTGGAATGTGCACGTGGACGGTCTGGAATACACCCACGACCTGATCGTGGAGCGCGAAGGTGTGTTCAAGGAATGCGTGGAGGCGATTCGCATGGCCAAGATTCTGGGCTACCAGGTGGCCACTAACACCACCGTCTACAAGGAAACTGACGCAAAGGAAATCGAGGAGATGTTCGCTTATTTTTCCTCGCTTGAGGTGGACGGCCACACAATTTCACCCGGCTACGACTACGACGCTGCGAAGAAGGATATGATGAAGCGGCTCGGGAAACAGCCCGAGGACTTCTTCCTGACGCGTGCGATGACTCGGGAGAAGTTCGCAAAGATCCAGGAATGGGGCGAGCGCTTCACGATTTTCGGCACGCCGGTTTACCAGGAGTTTCTGGCCGGCAAACGCGAGCTGACCTGCACCGCCTGGGCCATTCCCACCCGAAATATCAAAGGCTGGAAGGCTCCCTGCTACCTGATGACCGACGGTCATTATGACCGCTACCAGGAGATGCTCGACAAGGTGGATTGGACCAAATACGGCGTGGTGAACGGCGTCGCCCGCGATCACCGCTGCGAAAACTGCATGGTTCATTGCGGATACGACCCCAGCGGCGCCTTGGGCACCAATTACCAGCGCGGCGACAACTGGAAGAATTTTAGATACAACTTTTGGCCGCGTCCCAAGCCGAGTCCCGAGGGGAGCCGCGTCCAGGCGTTCAACGGTGCTACCATCGGCAAAGGTCATCTTGCCGAGGCTCGTGCGGCGGTGAATTCCGGCCTGGCCGGCGCCAAGTCCGCTTTTCAGCACAACGGGCATGAGGCCGGAAACGGCTCCCATGGAGGCGGATGCGGCACCGGAGACACCTCCCAGCGCGACGAACTGCTCGCCCGTATTCGCGAGTCGAGCCAGACCAAGAGCTAA
PROTEIN sequence
Length: 471
MRFPFALTVKIARHIISHKLRRTPRFAMVLQLEPLHTCNLTCTGCGRIREYSTSLKDMMSLEDCLGSATECDAPMVSICGGEPLIYPKIKELVDGLLAQARIVYVCTNGMFMRREMKDYLASSYTPALEPTLARLLSEKLISDKDVETIRKGPKDQRPPIKPSQWIYWNVHVDGLEYTHDLIVEREGVFKECVEAIRMAKILGYQVATNTTVYKETDAKEIEEMFAYFSSLEVDGHTISPGYDYDAAKKDMMKRLGKQPEDFFLTRAMTREKFAKIQEWGERFTIFGTPVYQEFLAGKRELTCTAWAIPTRNIKGWKAPCYLMTDGHYDRYQEMLDKVDWTKYGVVNGVARDHRCENCMVHCGYDPSGALGTNYQRGDNWKNFRYNFWPRPKPSPEGSRVQAFNGATIGKGHLAEARAAVNSGLAGAKSAFQHNGHEAGNGSHGGGCGTGDTSQRDELLARIRESSQTKS*