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PLM4_5_b1_sep16_scaffold_4018

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_5_b1_sep16_scaffold_4018_1
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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1..732
DNA (732bp) protein (244aa)
Tetratricopeptide TPR_2 repeat protein Tax=Pedosphaera parvula Ellin514 RepID=B9XQW1_9BACT
Tetratricopeptide TPR_2 repeat protein {ECO:0000313|EMBL:EEF57738.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
PLM4_5_b1_sep16_scaffold_4018_2
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

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757..1188
DNA (432bp) protein (144aa)
Uncharacterized protein Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZST2_OPITP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB74776.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
PLM4_5_b1_sep16_scaffold_4018_3
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

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comp(1198..2451)
DNA (1254bp) protein (418aa)
Sensor protein with an histidine kinase signal transduction domain (EC:2.7.13.3)
Response regulator receiver protein Tax=Pedosphaera parvula Ellin514 RepID=B9XS02_9BACT
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
PLM4_5_b1_sep16_scaffold_4018_4
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(2578..3549)
DNA (972bp) protein (324aa)
UDP-glucose 4-epimerase Tax=Pedosphaera parvula Ellin514 RepID=B9XPR8_9BACT
UDP-glucose 4-epimerase {ECO:0000313|EMBL:EEF58191.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
galE; UDP-glucose 4-epimerase
PLM4_5_b1_sep16_scaffold_4018_5
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(3583..5034)
DNA (1452bp) protein (484aa)
Hopanoid biosynthesis associated radical SAM protein HpnJ Tax=Pedosphaera parvula Ellin514 RepID=B9XKG4_9BACT
Hopanoid biosynthesis associated radical SAM protein HpnJ {ECO:0000313|EMBL:EEF59634.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hopanoid biosynthesis associated radical SAM protein HpnJ
PLM4_5_b1_sep16_scaffold_4018_6
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(5078..6490)
DNA (1413bp) protein (471aa)
Hopanoid biosynthesis associated radical SAM protein HpnH Tax=Pedosphaera parvula Ellin514 RepID=B9XKG5_9BACT
Hopanoid biosynthesis associated radical SAM protein HpnH {ECO:0000313|EMBL:EEF59635.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hopanoid biosynthesis associated radical SAM protein HpnH
PLM4_5_b1_sep16_scaffold_4018_7
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

6772..7632
DNA (861bp) protein (287aa)
Uncharacterized protein Tax=Pedosphaera parvula Ellin514 RepID=B9XKG6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF59636.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
PLM4_5_b1_sep16_scaffold_4018_8
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(7659..8447)
DNA (789bp) protein (263aa)
NADPH:quinone reductase (EC:1.6.5.5)
Alcohol dehydrogenase zinc-binding domain protein Tax=Pedosphaera parvula Ellin514 RepID=B9XIS6_9BACT
Alcohol dehydrogenase zinc-binding domain protein {ECO:0000313|EMBL:EEF60339.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
PLM4_5_b1_sep16_scaffold_4018_9
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria

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8704..9099
DNA (396bp) protein (132aa)
Putative fluoride ion transporter CrcB Tax=Rhodospirillum rubrum RepID=CRCB_RHORT
camphor resistance protein CrcB
Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
PLM4_5_b1_sep16_scaffold_4018_10
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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9103..9396
DNA (294bp) protein (98aa)
Uncharacterized protein Tax=Chthoniobacter flavus Ellin428 RepID=B4D572_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDY18277.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
PLM4_5_b1_sep16_scaffold_4018_11
Thiolapillus brandeum, Thiolapillus, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9463..11523)
DNA (2061bp) protein (687aa)
hypothetical protein Tax=Verrucomicrobia bacterium SCGC AAA164-E04 RepID=UPI00035F8234
conserved hypothetical protein
Thiolapillus brandeum DNA, complete genome {ECO:0000313|EMBL:BAO43709.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiolapillus.;" source="Thiolapillus brandeum.;"
PLM4_5_b1_sep16_scaffold_4018_12
Isosphaera pallida, Isosphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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11794..12882
DNA (1089bp) protein (363aa)
Redoxin domain protein Tax=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) RepID=E8R0M4_ISOPI
redoxin domain-containing protein
Redoxin domain protein {ECO:0000313|EMBL:ADV61209.1}; Flags: Precursor;; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Isosphaera.;" source="Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B).;"
PLM4_5_b1_sep16_scaffold_4018_13
RBG_13_Aminicenantes_59_9_curated, Aminicenantes, Bacteria

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comp(12899..14578)
DNA (1680bp) protein (560aa)
Penicillin-binding protein Tax=Robiginitalea biformata (strain ATCC BAA-864 / HTCC2501 / KCTC 12146) RepID=A4CHN6_ROBBH
beta-lactamase
Tax=RBG_13_Aminicenantes_59_9_curated
PLM4_5_b1_sep16_scaffold_4018_14
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

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comp(14613..16043)
DNA (1431bp) protein (477aa)
Parallel beta-helix repeat (Two copies) Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1NJZ1_DESSD
parallel beta-helix repeat (two copies)
Tax=RBG_16_Planctomycetes_55_9_curated
PLM4_5_b1_sep16_scaffold_4018_15
Shewanella sediminis, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16338..17291
DNA (954bp) protein (318aa)
Uncharacterized protein Tax=Shewanella sediminis (strain HAW-EB3) RepID=A8FZF7_SHESH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABV38230.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella sediminis (strain HAW-EB3).;"
Displaying 15 items

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