ggKbase home page

PLM4_5_b1_sep16_scaffold_4060_2

Organism: PLM4_5_b1_sep16_Verrucomicrobia_Verrucomicrobiales_60_7

near complete RP 41 / 55 MC: 1 BSCG 42 / 51 ASCG 9 / 38 MC: 1
Location: comp(363..1556)

Top 3 Functional Annotations

Value Algorithm Source
Arabinogalactan endo-1,4-beta-galactosidase (EC:3.2.1.89) similarity KEGG
DB: KEGG
  • Identity: 43.4
  • Coverage: 341.0
  • Bit_score: 271
  • Evalue 1.90e-70
Arabinogalactan endo-beta-1,4-galactanase {ECO:0000256|RuleBase:RU361192}; EC=3.2.1.89 {ECO:0000256|RuleBase:RU361192, ECO:0000313|EMBL:CCW36487.1};; species="Bacteria; Armatimonadetes; Chthonomonadetes; Chthonomonadales; Chthonomonadaceae; Chthonomonas.;" source="Chthonomonas calidirosea (strain DSM 23976 / ICMP 18418 / T49).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.4
  • Coverage: 341.0
  • Bit_score: 271
  • Evalue 9.60e-70
Arabinogalactan endo-1,4-beta-galactosidase Tax=Chthonomonas calidirosea T49 RepID=S0F046_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 43.4
  • Coverage: 341.0
  • Bit_score: 271
  • Evalue 6.90e-70

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Chthonomonas calidirosea → Chthonomonas → Chthonomonadales → Chthonomonadetes → Armatimonadetes → Bacteria

Sequences

DNA sequence
Length: 1194
ATGTCGCATCTCGCGTTCTTTGAACAACGCGGAGCTGACTACCGGGCGGGCGGCCAAACTCAGGATGCACTTTCCATCCTCAAAGACCGCGGCGTGAACTGTGTGCGGCTTCGACTGTTTACCAGCAGCGCCGCTCAGGCTCAGTCCGACCCCTACAACAGTACCAACAACCTGGATTACGCGGTACCGCTGGCTGTGCGTGCGAGGCACGCAGGCCTCCAATTCCTGCTGGATTTTCATTATTCCGCCACCTGGGCAGACCCGGGCCACCAGGCGAAACCCGCCGCCTGGACGAGCCTGACGTTCCAGCAACTGGTTCTGCAAATGCGCTTCTACAATAGCAACTGTATAGCGGCTTTCCGTGCGGCGGGCGCCATGCCTGAGTACGTGCAGGTAGGAAACGAGGTGATCGCAGGCATGCTTTGGCCGGACGGAGGCAACGGGGATGCCGCGCATTGGGGCCAATTCGGTCAACTCCTGAAGGCCGCCATTCAGGGGATCCGCGACGCGGCCGGCACGAACATGCCAAAGATCATCGTGCACATCGACCGCGGCGGTGATTGGGGAGCGACCCAGTGGTTCTTCGACAACCTGAACCAGCAGGGCGTGCCGTTCGATATCATCGGCCAGAGCTACTATCCTTTCTGGCATGGGAGCCTGGACGCCTTGCGAAATTGCCTAACTAACACAGTGAGTCGTTATCAAAAACCGGTGCTGGTGGCGGAGACGGCATTTCCCTTTACCAATTCTGCCGCTGTGCAGGGCATTCCCGCGAGCACCGACGGCCAGGTGACCTTCGCCATCGCGCTGGCGCAGATCGTCAAGAGTGTGCCCGGGTCGATGGGCATCGGCGTCTTCTGGTGGGGCACGGAATATCAGCCGCTGTCGGGATACAGCCTGGCTGGGTTTGATTCGAAGTCCTTCTTTGAGAATAGTGGCAATGTGCTGCCAGTGGCGGAGGCCTGGGGCCAATTCACCGCACCGCTGGTCATGAGCGCGACCCTGTCAGGAGCCGATTTGAGCCTGAGTTGGCCCCTCAGTGGGGCAGGCATGCCTTTGCTGGAGGCCTCAAGCCTGGAGCCTCTCGTATGGTTGCCTGTGCAGGATCCAATTCAGAGCTCAGGCCAGGGGTTTAGCGTCACGCTGCCACTGGGAGCGAACGGCCAGCGCTTTTACCGTCTGCAAGCCCACTAA
PROTEIN sequence
Length: 398
MSHLAFFEQRGADYRAGGQTQDALSILKDRGVNCVRLRLFTSSAAQAQSDPYNSTNNLDYAVPLAVRARHAGLQFLLDFHYSATWADPGHQAKPAAWTSLTFQQLVLQMRFYNSNCIAAFRAAGAMPEYVQVGNEVIAGMLWPDGGNGDAAHWGQFGQLLKAAIQGIRDAAGTNMPKIIVHIDRGGDWGATQWFFDNLNQQGVPFDIIGQSYYPFWHGSLDALRNCLTNTVSRYQKPVLVAETAFPFTNSAAVQGIPASTDGQVTFAIALAQIVKSVPGSMGIGVFWWGTEYQPLSGYSLAGFDSKSFFENSGNVLPVAEAWGQFTAPLVMSATLSGADLSLSWPLSGAGMPLLEASSLEPLVWLPVQDPIQSSGQGFSVTLPLGANGQRFYRLQAH*