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PLM4_5_b1_sep16_scaffold_4060

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_5_b1_sep16_scaffold_4060_1
unknown

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comp(2..124)
DNA (123bp) protein (41aa)

This feature has no annotations

PLM4_5_b1_sep16_scaffold_4060_2
Chthonomonas calidirosea, Chthonomonas, Chthonomonadales, Chthonomonadetes, Armatimonadetes, Bacteria

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comp(363..1556)
DNA (1194bp) protein (398aa)
Arabinogalactan endo-1,4-beta-galactosidase (EC:3.2.1.89)
Arabinogalactan endo-beta-1,4-galactanase {ECO:0000256|RuleBase:RU361192}; EC=3.2.1.89 {ECO:0000256|RuleBase:RU361192, ECO:0000313|EMBL:CCW36487.1};; species="Bacteria; Armatimonadetes; Chthonomonadetes; Chthonomonadales; Chthonomonadaceae; Chthonomonas.;" source="Chthonomonas calidirosea (strain DSM 23976 / ICMP 18418 / T49).;"
Arabinogalactan endo-1,4-beta-galactosidase Tax=Chthonomonas calidirosea T49 RepID=S0F046_9BACT
PLM4_5_b1_sep16_scaffold_4060_3
RBG_13_Planctomycetes_60_9_curated, Phycisphaerae, Planctomycetes, Bacteria

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1940..3916
DNA (1977bp) protein (659aa)
Sugar phosphate isomerase bin=GWF2_Lentisphaerae_49_21 species=Spirochaeta smaragdinae genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
sugar phosphate isomerase
Tax=RBG_13_Planctomycetes_60_9_curated
PLM4_5_b1_sep16_scaffold_4060_4
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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3916..4767
DNA (852bp) protein (284aa)
Nicotinate-nucleotide pyrophosphorylase {ECO:0000313|EMBL:EEF60180.1}; EC=2.4.2.19 {ECO:0000313|EMBL:EEF60180.1};; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
nicotinate-nucleotide pyrophosphorylase (EC:2.4.2.19)
Nicotinate-nucleotide pyrophosphorylase Tax=Pedosphaera parvula Ellin514 RepID=B9XIV3_9BACT
PLM4_5_b1_sep16_scaffold_4060_5
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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4764..5738
DNA (975bp) protein (325aa)
biotin--acetyl-CoA-carboxylase ligase (EC:6.3.4.15)
Biotin/acetyl-CoA-carboxylase ligase Tax=Pedosphaera parvula Ellin514 RepID=B9XIV4_9BACT
Bifunctional ligase/repressor BirA {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--[acetyl-CoA-carboxylase] ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--protein ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin-[acetyl-CoA carboxylase] synthetase {ECO:0000256|HAMAP-Rule:MF_00978}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
PLM4_5_b1_sep16_scaffold_4060_6
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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5756..6511
DNA (756bp) protein (252aa)
Type III pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_01274};; PanK-III {ECO:0000256|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000256|HAMAP-Rule:MF_01274}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Type III pantothenate kinase Tax=Pedosphaera parvula Ellin514 RepID=B9XIV5_9BACT
pantothenate kinase
PLM4_5_b1_sep16_scaffold_4060_7
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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6571..7332
DNA (762bp) protein (254aa)
Tryptophan synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|RuleBase:RU000601}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|RuleBase:RU000601};; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
tryptophan synthase subunit alpha (EC:4.2.1.20)
Tryptophan synthase alpha chain Tax=Pedosphaera parvula Ellin514 RepID=B9XIV6_9BACT
PLM4_5_b1_sep16_scaffold_4060_8
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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7337..8479
DNA (1143bp) protein (381aa)
Mannose-1-phosphate guanylyltransferase (GDP) {ECO:0000313|EMBL:EEF60184.1}; EC=2.7.7.22 {ECO:0000313|EMBL:EEF60184.1};; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Mannose-1-phosphate guanylyltransferase (GDP) Tax=Pedosphaera parvula Ellin514 RepID=B9XIV7_9BACT
mannose-1-phosphate guanyltransferase
PLM4_5_b1_sep16_scaffold_4060_9
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

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8502..10502
DNA (2001bp) protein (667aa)
beta-galactosidase (EC:3.2.1.23)
Beta-galactosidase {ECO:0000313|EMBL:ACB76206.1}; EC=3.2.1.23 {ECO:0000313|EMBL:ACB76206.1};; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
Beta-galactosidase Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZY57_OPITP
Displaying 9 items

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