ggKbase home page

PLM4_5_b1_sep16_scaffold_4694_3

Organism: PLM4_5_b1_sep16_Verrucomicrobia_Verrucomicrobiales_60_7

near complete RP 41 / 55 MC: 1 BSCG 42 / 51 ASCG 9 / 38 MC: 1
Location: comp(2188..3207)

Top 3 Functional Annotations

Value Algorithm Source
Peptidase dimerisation domain protein Tax=Pedosphaera parvula Ellin514 RepID=B9XMC2_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 54.8
  • Coverage: 252.0
  • Bit_score: 263
  • Evalue 1.60e-67
Peptidase dimerisation domain protein {ECO:0000313|EMBL:EEF58964.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.8
  • Coverage: 252.0
  • Bit_score: 263
  • Evalue 2.20e-67
acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase similarity KEGG
DB: KEGG
  • Identity: 35.3
  • Coverage: 323.0
  • Bit_score: 152
  • Evalue 1.90e-34

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1020
ATGACCCGAACGGAAAAATTGCTTCGCGACCTGGTGGCGCTTCCCAGCGTCAACCCCGCTTTTTTGCCGCCCGGTCATCCGCATGCCGGCGAGCGCGCGGTGCAGGAGTATGTCGCCGCGGCGGCGGCGCAAGCGGGATTGGTGGTCAAGTTTCAGAAGGCCGCCCCGGGCCGGGCCAACCTGTTGTCGCGGCTCAGTCCCTCCGGCGCGGTTAAGCACCGGGTCCTGCTGGTGCCCCACGTGGATACGGTCAACGCCGATCCGAAGTGTTTCCGGCCCCGGACTTCCCAAGGCCGGCTTTTTGGCCGGGGCGCCTGTGACACGAAGGGGTCTGTCGCCGCCATGCTCTCGGCGGTGATCGAAGTTGCCGCTCAACGGAAACGTCCCCGCGAAACCGAGATCCTGCTGGCGACGGTTGTGGATGAGGAGAACGCGCAGCTCGGATCACAAGTGCTGGCGGCCTCCGGGATCAAGGCCGACTTTGCCATCGTCGGAGAACCCACCAGCGCGCGCGTCGTCACCGCGCACAAAGGCAGCCTCTGGCTCCGGATCGAAACGCAGGGCAGGGCGGCCCACGGGGCCTTGCCGAACCTGGGCCACAACGCCGTGCACGACATGGCGCGAGTCGTGGCGCTGCTCGAGGGTCCCTACGCCAGGAACCTGCTGCGCCACAAACATCCTTTGCTCGAGGTGTCTGTGGTCAGGCACATCGGCAAATTGATTCGCTCGATCGGAGTGAAGGCCTTGATTACTGGCGAAAAGAGCGGGCCGACCTCACCTTTGGAAACACCCTCTGATCACCCCCTGGTTCAATTGTTCCTGGAGTCGGCGCGGCAGCGGCGGCCCCTGGGGGTCCACTATTTCTGCGATGCTTCCGTCCTGGCCGCGGCTGGTATCCCCAGCGTCGTGTTCGGCCCGGGGGACATCGCCCAGGCGCACACTGCCGACGAGTGGATCAGCCTGGAGTCTCTCGAACTGGCAAAAAGCAGGCTCGTGCGGTTCCTCTCCGCTCTCCCTTGA
PROTEIN sequence
Length: 340
MTRTEKLLRDLVALPSVNPAFLPPGHPHAGERAVQEYVAAAAAQAGLVVKFQKAAPGRANLLSRLSPSGAVKHRVLLVPHVDTVNADPKCFRPRTSQGRLFGRGACDTKGSVAAMLSAVIEVAAQRKRPRETEILLATVVDEENAQLGSQVLAASGIKADFAIVGEPTSARVVTAHKGSLWLRIETQGRAAHGALPNLGHNAVHDMARVVALLEGPYARNLLRHKHPLLEVSVVRHIGKLIRSIGVKALITGEKSGPTSPLETPSDHPLVQLFLESARQRRPLGVHYFCDASVLAAAGIPSVVFGPGDIAQAHTADEWISLESLELAKSRLVRFLSALP*