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PLM4_5_b1_sep16_scaffold_4694_7

Organism: PLM4_5_b1_sep16_Verrucomicrobia_Verrucomicrobiales_60_7

near complete RP 41 / 55 MC: 1 BSCG 42 / 51 ASCG 9 / 38 MC: 1
Location: comp(5076..5558)

Top 3 Functional Annotations

Value Algorithm Source
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395}; Short=MECDP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPS {ECO:0000256|HAMAP-Rule:MF_00107};; EC=4.6.1.12 {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395};; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.6
  • Coverage: 159.0
  • Bit_score: 261
  • Evalue 6.90e-67
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase Tax=Pedosphaera parvula Ellin514 RepID=B9XIA9_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 78.6
  • Coverage: 159.0
  • Bit_score: 261
  • Evalue 4.90e-67
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase similarity KEGG
DB: KEGG
  • Identity: 59.6
  • Coverage: 156.0
  • Bit_score: 194
  • Evalue 2.10e-47

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 483
ATGGTTCACGTGGGCACTGGTTACGACGTTCATGCATTGGTGGAAGGCCGAAAATGTATCCTTGGCGGGGTGGAAATACCCCATGCCCGGGGTCTGGACGGCCATTCCGACGCTGATGCCCTGATGCACGCGATTTGCGACGCCATACTCGGGGCGTTGGGCGAGCCCGACATCGGCCATTTTTTTCCGAACACAGATCCTCGCTGGAAGGGGGCTCCAAGCAAGGTCTTCCTCCAGGAGGCCGCCCGCCAGGTCGTCGCGCGCGGTGGCAGGTTGGTCAACATCGATGCCACCGTCATCGCCCAGGCTCCGAAAATCTACCCCCATATCCAGGAGATGAAAAAGCAAATCGGCCAAGCCCTGGGGCTGGAGCCGCGCCTGGTAGGCATCAAGGCAACCACGAACGAGCATATGGGATTCATCGGCCGCGAGGAAGGCATCGCCGCGATGGCGGTGGCCAGCATCGATCTGCCTGAGAATTGA
PROTEIN sequence
Length: 161
MVHVGTGYDVHALVEGRKCILGGVEIPHARGLDGHSDADALMHAICDAILGALGEPDIGHFFPNTDPRWKGAPSKVFLQEAARQVVARGGRLVNIDATVIAQAPKIYPHIQEMKKQIGQALGLEPRLVGIKATTNEHMGFIGREEGIAAMAVASIDLPEN*