ggKbase home page

PLM4_5_b1_sep16_scaffold_6708_5

Organism: PLM4_5_b1_sep16_Verrucomicrobia_Verrucomicrobiales_60_7

near complete RP 41 / 55 MC: 1 BSCG 42 / 51 ASCG 9 / 38 MC: 1
Location: comp(3069..4526)

Top 3 Functional Annotations

Value Algorithm Source
PKD domain containing protein Tax=Pedosphaera parvula Ellin514 RepID=B9XS25_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 28.0
  • Coverage: 164.0
  • Bit_score: 68
  • Evalue 1.10e-08
PKD domain containing protein {ECO:0000313|EMBL:EEF57357.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 28.0
  • Coverage: 164.0
  • Bit_score: 68
  • Evalue 1.50e-08

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1458
ATGAAACTGTTCGAAACGAATCCCCGGCTGCTTAGTTGCGCCGTGCTCAGCGCGTCGGTCGCCATTGCCACCTCCCAATCATGGCAACCAACTACCAGTTACCCACTTGCACTCTATCAAGCCGACATCACGGAATACGCCGGAAAGATCTATGTGGCCGGCGGCCTGGATGTCGCACCCATTGCCACAGTGTCGGTAGGGACGTTGGGGGTCGACGGCTCGGTTCTGTCGTGGACCGCCACTACCCCGTTGCCCTCGCCGAATCTGCCCGGCCTGGCCGCGTTCAACGGCTGGGTCTATGCCGCATTGACGAACGGCGCCATCTGCCGGGCGCGAATACTTCCCGGCGGTGGGCTCGACGCTTGGATTACCGAAACCCAGGCCGTAGACCCCAGCCGCGCATACAGCACGGTTCTCAAAACCTATAATGGGTCTCTTTACCTCTTTGGCCGCTGGGAAACCTCTGCCGCCAATGTGGTCCGCATCGCCCCCATCAGGCCAGACGGCTCCGTAGGCGCCTGGAGTGCCGGGTCGCTGCCGATGACCCTCTATCGGCCGGCGGTGCAATTCCTCAACAACCGCGTTTATCTCGCCGGCGGTCTCGCCACTATTTATTTCTTCAATGACGTTTGGGGGCTCACCTACTCGGCCCCGGTGTTTGCCGACGGCTCGGTGGGAGCATGGCGGCAGGAAGCTGATCTCCTGGCGCGCCTTTGGATGCACACCAGCGTCATCGTCAGCAACCAGGTTTATATCATCGGCGGCCTTACGAACCAGGATTCGAGGTCGGTCTGCACCACCGTTTTCCGCGGAACTATTCAAGAGTCGGACGGCTCAATCCGCTCGTGGCCGGCGCTCGAATCGATGCCCTCGGAGTTCGTCTTCGGCAACTCCGCGGTCTACTCCCCTTTCAGCCCTCAGGCTGCCATATTGGTTTCCCCGATTGTCGATCTGCCGGGATTTGATTCGCCCACGGTTCTCGCCCGAAGTCCTATGAGCGCCAAGGTGCTGCTCAATGCCCGCCAAAGCAACGATCCCGATGGCGATTCCCTTACCTTTGAATGGAAGATCGACGGCGCCGCGGTATCCGCCGACATGGAGGCCACTGCCGACCTGGGCATTGGAAAGCATGTTGTTGGCCTGACCGCCAATGACGGAAAAACCACCGGCTCCGATGAAATCGTGGTGCAGGTCGTCGGCGCGGTGGACGTGCTCAATCAGTTGATCAGCGCCGTCGCGAACTCCTCGATCCCGGAAAAGCGAAAGACCCCGTTGCTGGCATCGTTGAATGCCGCGGAAGCCGCGCTTAACCGCGGAAACCAAAACGCCGCCCTGAATCAACTCGTCGCCTTCCAGCACAAACTTTCCGCGCAAATCGCGGGAGCTTATCCCGACCTGGCAAACCTCTGGGGCGGCCTCGCCACATTGGTCGCGGATACGGTTGCCGGCCAGCCTTAG
PROTEIN sequence
Length: 486
MKLFETNPRLLSCAVLSASVAIATSQSWQPTTSYPLALYQADITEYAGKIYVAGGLDVAPIATVSVGTLGVDGSVLSWTATTPLPSPNLPGLAAFNGWVYAALTNGAICRARILPGGGLDAWITETQAVDPSRAYSTVLKTYNGSLYLFGRWETSAANVVRIAPIRPDGSVGAWSAGSLPMTLYRPAVQFLNNRVYLAGGLATIYFFNDVWGLTYSAPVFADGSVGAWRQEADLLARLWMHTSVIVSNQVYIIGGLTNQDSRSVCTTVFRGTIQESDGSIRSWPALESMPSEFVFGNSAVYSPFSPQAAILVSPIVDLPGFDSPTVLARSPMSAKVLLNARQSNDPDGDSLTFEWKIDGAAVSADMEATADLGIGKHVVGLTANDGKTTGSDEIVVQVVGAVDVLNQLISAVANSSIPEKRKTPLLASLNAAEAALNRGNQNAALNQLVAFQHKLSAQIAGAYPDLANLWGGLATLVADTVAGQP*