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PLM4_5_b1_sep16_scaffold_6708_10

Organism: PLM4_5_b1_sep16_Verrucomicrobia_Verrucomicrobiales_60_7

near complete RP 41 / 55 MC: 1 BSCG 42 / 51 ASCG 9 / 38 MC: 1
Location: comp(6693..7586)

Top 3 Functional Annotations

Value Algorithm Source
Xylose isomerase domain protein TIM barrel Tax=Pedosphaera parvula Ellin514 RepID=B9XQU2_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 63.8
  • Coverage: 298.0
  • Bit_score: 393
  • Evalue 1.20e-106
Xylose isomerase domain protein TIM barrel {ECO:0000313|EMBL:EEF57799.1}; Flags: Precursor;; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.8
  • Coverage: 298.0
  • Bit_score: 393
  • Evalue 1.60e-106
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 56.5
  • Coverage: 313.0
  • Bit_score: 350
  • Evalue 4.20e-94

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 894
ATGAAACTAAATCGTCGCGAATTCCTCGCTGCCTCCGCCATTACCACTGTCATGGGAGCCACCGCACCCCTCGCGGGCGCCGCCACCCTTACTGAGCCCGAACCCAAAGCCCGCCTCCGCCTGTCCTGCCAGGAGGGCGTCGCGCCGGGTAAATCCCTTGCCGAAAAACTGGATTTCCTCGAAGCCAACGGCTTCGAAGGCCTCGAGCCCGGGGGCGGGGGCCTGTCCAAACGCGTGGAAGAATTCCAGAAAGCTCTCTCCGGCCGCAAAGTCAAAATCAGCGCGATATGCGCCGGCTTCAAAGGCTGCCTGATTTCCGAGCAGGAGGATAACCGCAAGCAGGCCATCGAGAGCATGAAAGAGATTCTCACCGCGGCGGGGGCGCTCGGCTCCACCGGCTTGATCATCGTGCCGGCCTTCCATGGACAGACCAAACTCGACCACAAGGAATCACGCGAGCTGCTGGTAAAACTGCTGGCCGACTTGGGCGATCACGCTCACAAAGCCGGCACGAAAGTCCTCCTCGAACCGCTGAACCGCCGCGAATGCCATTTCCTGCGCCAGGTCCCCGATGCCGCTGCCATCTGCAAAGATGTGAACAGTCCCGGCGTCGCCCTGATGGGCGATTTCTGGCATATGACCTGGGAGGAAACCTGCGATATGGCGGCGTTCCTGTCCGCCGGCAAATATCTCCAGCACGTGCATATGGCCAGCCGCAAACAGCGCCGCATGCCCGGCGAGGACGAGGGCGACAATTACGTCCAGGGCTTCAAAGGACTGAAGTTGATCGGCTACGGCAATTACGTCAGCTTTGAGTGCGGTTGCTCGGGCGACAAGCTCAAGGTGATTCCCGACGCGGTGAAACTGCTGAAAGACCAGTGGGCCATGGCCTGA
PROTEIN sequence
Length: 298
MKLNRREFLAASAITTVMGATAPLAGAATLTEPEPKARLRLSCQEGVAPGKSLAEKLDFLEANGFEGLEPGGGGLSKRVEEFQKALSGRKVKISAICAGFKGCLISEQEDNRKQAIESMKEILTAAGALGSTGLIIVPAFHGQTKLDHKESRELLVKLLADLGDHAHKAGTKVLLEPLNRRECHFLRQVPDAAAICKDVNSPGVALMGDFWHMTWEETCDMAAFLSAGKYLQHVHMASRKQRRMPGEDEGDNYVQGFKGLKLIGYGNYVSFECGCSGDKLKVIPDAVKLLKDQWAMA*