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PLM4_65_coex_sep16_scaffold_5346

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM4_65_coex_sep16_scaffold_5346_1
Geobacter sp. OR-1, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(44..1690)
DNA (1647bp) protein (549aa)
Nickel-dependent hydrogenase, large subunit Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LMH4_SYNFM
Periplasmic [NiFe] hydrogenase large subunit {ECO:0000313|EMBL:GAM09452.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. OR-1.;"
nickel-dependent hydrogenase large subunit
PLM4_65_coex_sep16_scaffold_5346_2
Geobacter sp. OR-1, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1734..2657)
DNA (924bp) protein (308aa)
Hydrogenase (NiFe) small subunit HydA Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LMH5_SYNFM
Periplasmic [NiFe] hydrogenase small subunit 1 {ECO:0000313|EMBL:GAM09451.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. OR-1.;"
hydrogenase (NiFe) small subunit HydA
PLM4_65_coex_sep16_scaffold_5346_trna_1
unknown

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comp(3141..3214)
DNA (74bp)
transferRNA Pro
PLM4_65_coex_sep16_scaffold_5346_3
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3247..3600)
DNA (354bp) protein (118aa)
Transcriptional regulator, MerR family Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G4T0_GEOUR
MerR family transcriptional regulator
Transcriptional regulator, MerR family {ECO:0000313|EMBL:ABQ26798.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_5346_4
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3619..3897)
DNA (279bp) protein (93aa)
Histone family protein DNA-binding protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G4T1_GEOUR
histone family protein DNA-binding protein
Histone family protein DNA-binding protein {ECO:0000313|EMBL:ABQ26799.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM4_65_coex_sep16_scaffold_5346_5
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3990..6395)
DNA (2406bp) protein (802aa)
pheT; phenylalanyl-tRNA synthetase subunit beta (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
Phenylalanine--tRNA ligase beta subunit Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G4T2_GEOUR
PLM4_65_coex_sep16_scaffold_5346_6
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6459..7460)
DNA (1002bp) protein (334aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000255|HAMAP-Rule:MF_00281}; EC=6.1.1.20 {ECO:0000255|HAMAP-Rule:MF_00281};; Phenylalanyl-tRNA synthetase alpha subunit {ECO:0000255|HAMAP-Rule:MF_00281}; Short=PheRS {ECO:0000255|HAMAP-Rule:MF_00281};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
Phenylalanine--tRNA ligase alpha subunit Tax=Geobacter uraniireducens (strain Rf4) RepID=SYFA_GEOUR
pheS; phenylalanyl-tRNA synthetase subunit alpha
Displaying 7 items

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