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qh_1_scaffold_3297

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_1_scaffold_3297_1
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2..133
DNA (132bp) protein (44aa)
atpC1; H+ ATP synthase sununit C (EC:3.6.3.14)
ATP synthase subunit C n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LK85_HALJP
ATP synthase subunit C {ECO:0000313|EMBL:EMA32854.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 6131
qh_1_scaffold_3297_2
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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137..712
DNA (576bp) protein (192aa)
V-type proton ATPase subunit E n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P2S7_HALMD
V-type ATP synthase subunit E
V-type proton ATPase subunit E {ECO:0000256|HAMAP-Rule:MF_00311}; V-ATPase subunit E {ECO:0000256|HAMAP-Rule:MF_00311}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal
qh_1_scaffold_3297_3
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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709..1767
DNA (1059bp) protein (353aa)
ntpC; V-type ATP synthase subunit C (EC:3.6.3.14)
V-type ATP synthase subunit C n=3 Tax=Haloarcula RepID=Q5UXZ0_HALMA
V-type ATP synthase subunit C {ECO:0000256|HAMAP-Rule:MF_00314}; V-ATPase subunit C {ECO:0000256|HAMAP-Rule:MF_00314}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halo
qh_1_scaffold_3297_4
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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1764..2087
DNA (324bp) protein (108aa)
atpF; A-type ATP synthase subunit F (EC:3.6.3.14)
V-type ATP synthase subunit F n=1 Tax=Haloquadratum walsbyi J07HQW1 RepID=U1MSJ1_9EURY
V-type ATP synthase subunit F {ECO:0000256|HAMAP-Rule:MF_00312}; V-ATPase subunit F {ECO:0000256|HAMAP-Rule:MF_00312}; TaxID=1238424 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Halof
qh_1_scaffold_3297_5
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2090..3025
DNA (936bp) protein (312aa)
ntpA; V-type ATP synthase subunit A (EC:3.6.3.14)
V-type ATP synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00309}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_00309};; V-ATPase subunit A {ECO:0000256|HAMAP-Rule:MF_00309}; TaxID=662475 species="Archaea;
V-type ATP synthase alpha chain n=4 Tax=Haloarcula RepID=VATA_HALMA
qh_1_scaffold_3297_6
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3004..3789
DNA (786bp) protein (262aa)
V-type ATP synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00309}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_00309};; V-ATPase subunit A {ECO:0000256|HAMAP-Rule:MF_00309}; TaxID=485914 species="Archaea;
V-type ATP synthase alpha chain n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P2T0_HALMD
V-type ATP synthase subunit A
qh_1_scaffold_3297_7
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3792..5210
DNA (1419bp) protein (473aa)
atpB; V-type ATP synthase subunit B (EC:3.6.3.14)
V-type ATP synthase beta chain n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=VATB_NATPD
V-type ATP synthase beta chain {ECO:0000255|HAMAP-Rule:MF_00310}; V-ATPase subunit B {ECO:0000255|HAMAP-Rule:MF_00310}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal
qh_1_scaffold_3297_8
Halorubrum kocurii, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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5309..6112
DNA (804bp) protein (268aa)
Bacteriorhodopsin n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0NWE5_9EURY
Bacteriorhodopsin {ECO:0000313|EMBL:EMA62282.1}; TaxID=1230456 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum kocurii JCM 14978.;"
bop; bacteriorhodopsin
qh_1_scaffold_3297_9
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6169..6621
DNA (453bp) protein (151aa)
crtY; lycopene cyclase (EC:1.14.-.-) id=24614177 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Lycopene cyclase domain-containing protein {ECO:0000313|EMBL:ESP89259.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source
lycopene cyclase domain-containing protein
qh_1_scaffold_3297_10
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6857..7891
DNA (1035bp) protein (345aa)
Brp-like protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D420_9EURY
Brp-like protein {ECO:0000313|EMBL:ELZ28904.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.;"
blh; brp-like protein
qh_1_scaffold_3297_11
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7939..8634
DNA (696bp) protein (232aa)
ATP synthase subunit D n=1 Tax=Halomicrobium katesii RepID=UPI00037EB4EC
V-type ATP synthase subunit D
V-type ATP synthase subunit D {ECO:0000256|HAMAP-Rule:MF_00271}; V-ATPase subunit D {ECO:0000256|HAMAP-Rule:MF_00271}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halo
qh_1_scaffold_3297_12
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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8645..9031
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2RPS1_HALTV
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB62223.1}; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena turkmenica (strai
qh_1_scaffold_3297_13
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(8895..10178)
DNA (1284bp) protein (428aa)
Peptide chain release factor subunit 1 n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NTI8_HALUD
peptide chain release factor 1
Peptide chain release factor subunit 1 {ECO:0000256|HAMAP-Rule:MF_00424}; Translation termination factor aRF1 {ECO:0000256|HAMAP-Rule:MF_00424}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacte
qh_1_scaffold_3297_14
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(10216..11883)
DNA (1668bp) protein (556aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=1227453 species="Archaea; Eury
argS; arginyl-tRNA synthetase (EC:6.1.1.19)
Arginine--tRNA ligase n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LA92_HALJP
qh_1_scaffold_3297_15
unknown

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comp(12024..12320)
DNA (297bp) protein (99aa)

This feature has no annotations

Displaying 15 items

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