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qh_1_scaffold_4844

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_1_scaffold_4844_1
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2..2188
DNA (2187bp) protein (729aa)
tatC1; Sec-independent protein translocase component TatC1; K03118 sec-independent protein translocase protein TatC id=24647688 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Sec-independent protein secretion pathway component TatC {ECO:0000313|EMBL:ERH08822.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07H
tatC; twin-arginine translocation protein TatC
qh_1_scaffold_4844_2
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2272..2664
DNA (393bp) protein (131aa)
Holliday junction resolvase Hjc {ECO:0000256|HAMAP-Rule:MF_01490}; Short=Hjc {ECO:0000256|HAMAP-Rule:MF_01490};; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_01490};; TaxID=1325472 species="Archaea; Euryarc
hjc; Holliday junction resolvase
hjc; Holliday junction resolvase; K03552 holliday junction resolvase, archaea type id=24654511 bin=uncultured_archaeon_J07HX5 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultured_archaeon_J07HX5
qh_1_scaffold_4844_3
unknown

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comp(2671..2850)
DNA (180bp) protein (60aa)

This feature has no annotations

qh_1_scaffold_4844_4
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(2882..3757)
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2S1D4_HALTV
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB63181.1}; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena turkmenica (strai
qh_1_scaffold_4844_5
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3868..4497)
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D353_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ29283.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qh_1_scaffold_4844_6
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4654..4878
DNA (225bp) protein (75aa)
hypothetical protein n=1 Tax=Halomicrobium katesii RepID=UPI0003807616
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV47123.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
qh_1_scaffold_4844_7
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5037..5684)
DNA (648bp) protein (216aa)
DNA primase large subunit PriL n=1 Tax=halophilic archaeon J07HX64 RepID=U1PL28_9EURY
DNA primase large subunit PriL {ECO:0000256|HAMAP-Rule:MF_00701}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
DNA primase
qh_1_scaffold_4844_8
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5991..6566)
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=halophilic archaeon J07HX64 RepID=U1QU75_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERH10833.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
qh_1_scaffold_4844_9
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6648..7391)
DNA (744bp) protein (248aa)
DNA polymerase sliding clamp n=1 Tax=halophilic archaeon J07HX64 RepID=U1QTB0_9EURY
DNA polymerase sliding clamp {ECO:0000256|HAMAP-Rule:MF_00317, ECO:0000256|RuleBase:RU003673}; Proliferating cell nuclear antigen homolog {ECO:0000256|HAMAP-Rule:MF_00317}; TaxID=1085028 species="Arch
dnaN1; DNA polymerase sliding clamp
qh_1_scaffold_4844_10
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7485..8258
DNA (774bp) protein (258aa)
Ribosomal RNA large subunit methyltransferase E {ECO:0000256|HAMAP-Rule:MF_01547}; EC=2.1.1.166 {ECO:0000256|HAMAP-Rule:MF_01547};; 23S rRNA Um2552 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547};
Ribosomal RNA large subunit methyltransferase E n=1 Tax=Halorhabdus tiamatea SARL4B RepID=S6D0H4_9EURY
ribosomal RNA methyltransferase RrmJ/FtsJ
qh_1_scaffold_4844_11
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8865..9287
DNA (423bp) protein (141aa)
Selenium-binding protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LIU9_HALJP
Selenium-binding protein {ECO:0000313|EMBL:EMA33456.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 61
seb; selenium-binding protein
Displaying 11 items

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