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QH_10_Halobacteriales_66_47

In projects: QH_10  |  diaphorachaeota  |  archaea_ggkbase

Consensus taxonomy: Halobacteriales  →  Halobacteria  →  Euryarchaeota  →  Archaea

Taxonomy override: Euryarchaeota

Metagenomic Context

Parent: QH_10_UNK

Properties

Avg. coverage: 47.31 Longest contig: 24.59 Kbp Bin length: 1.87 Mbp GC content: 66.24 %
Contigs count: 303 Features count: 2153 rRNAs count: 0 tRNAs count: 0

Genome completeness

partial RP 22 / 55 MC: 3 BSCG 19 / 51 MC: 2 ASCG 26 / 38 MC: 3
Displaying items 1-50 of 303 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qh_10_scaffold_4757
Order: Halobacteriales (62.5%)
32 24594 bp 65.52 50.33 82.28
qh_10_scaffold_1052
Order: Halobacteriales (76%)
25 23839 bp 65.12 44.51 78.01
qh_10_scaffold_429
Order: Halobacteriales (91.3%)
23 20475 bp 67.63 47.94 85.00
qh_10_scaffold_850
Order: Halobacteriales (50%)
20 20419 bp 64.48 46.89 80.60
qh_10_scaffold_2844
Class: Halobacteria (83.33%)
18 14089 bp 68.21 52.20 77.66
qh_10_scaffold_464
Class: Halobacteria (58.82%)
17 20054 bp 62.96 66.88 88.19
qh_10_scaffold_1954
Class: Halobacteria (76.47%)
17 15685 bp 66.24 52.35 89.00
qh_10_scaffold_1217
Order: Halobacteriales (82.35%)
17 17381 bp 66.55 46.68 87.47
qh_10_scaffold_980
Order: Halobacteriales (87.5%)
16 15056 bp 67.38 47.48 88.19
qh_10_scaffold_1216
Order: Halobacteriales (50%)
16 14302 bp 67.59 46.98 80.15
qh_10_scaffold_7853
Order: Halobacteriales (75%)
16 10065 bp 65.59 51.41 85.66
qh_10_scaffold_9852
Order: Halobacteriales (66.67%)
15 9752 bp 64.67 50.34 78.48
qh_10_scaffold_3184
Order: Halobacteriales (66.67%)
15 11406 bp 65.08 42.62 84.51
qh_10_scaffold_6904
Class: Halobacteria (80%)
15 15120 bp 65.98 52.57 80.69
qh_10_scaffold_147
Order: Halobacteriales (64.29%)
14 18008 bp 67.31 39.34 88.73
qh_10_scaffold_6182
Order: Halobacteriales (57.14%)
14 12366 bp 66.24 47.36 80.74
qh_10_scaffold_3163
Order: Halobacteriales (64.29%)
14 9011 bp 66.47 51.43 87.79
qh_10_scaffold_2494
Order: Halobacteriales (78.57%)
14 9632 bp 64.23 49.53 94.90
qh_10_scaffold_5469
Class: Halobacteria (84.62%)
13 8436 bp 67.97 45.58 72.76
qh_10_scaffold_2842
Class: Halobacteria (92.31%)
13 11896 bp 64.48 50.24 83.57
qh_10_scaffold_3913
Order: Halobacteriales (61.54%)
13 8707 bp 66.85 56.33 81.21
qh_10_scaffold_1326
Order: Halobacteriales (53.85%)
13 9429 bp 65.86 44.91 85.65
qh_10_scaffold_9893
Order: Halobacteriales (84.62%)
13 9361 bp 63.36 43.49 69.45
qh_10_scaffold_8654
Order: Halobacteriales (69.23%)
13 7388 bp 67.47 49.12 74.39
qh_10_scaffold_3547
Order: Halobacteriales (69.23%)
13 8781 bp 64.76 31.96 85.72
qh_10_scaffold_5212
Order: Halobacteriales (50%)
12 10747 bp 65.78 49.05 82.66
qh_10_scaffold_794
Order: Halobacteriales (58.33%)
12 15440 bp 64.31 49.78 84.05
qh_10_scaffold_3385
Order: Halobacteriales (58.33%)
12 10593 bp 66.67 41.08 83.12
qh_10_scaffold_4113
Order: Halobacteriales (66.67%)
12 9176 bp 66.31 31.85 84.51
qh_10_scaffold_559
Order: Halobacteriales (50%)
12 10011 bp 62.65 35.80 85.20
qh_10_scaffold_537
Class: Halobacteria (75%)
12 15336 bp 66.01 50.76 85.56
qh_10_scaffold_2741
Order: Halobacteriales (83.33%)
12 10213 bp 64.46 55.92 75.61
qh_10_scaffold_8036
Order: Natrialbales (50%)
12 10639 bp 66.24 53.44 86.03
qh_10_scaffold_1968
Order: Halobacteriales (66.67%)
12 7243 bp 66.53 50.34 84.83
qh_10_scaffold_1364
Class: Halobacteria (83.33%)
12 13297 bp 58.44 33.65 73.44
qh_10_scaffold_2624
Order: Halobacteriales (58.33%)
12 10793 bp 68.59 52.41 91.17
qh_10_scaffold_2722
Class: Halobacteria (91.67%)
12 11303 bp 62.84 56.84 82.57
qh_10_scaffold_12491
Order: Halobacteriales (58.33%)
12 7526 bp 64.95 43.66 74.78
qh_10_scaffold_2331
Class: Halobacteria (72.73%)
11 8388 bp 65.38 52.50 86.30
qh_10_scaffold_3719
Class: Halobacteria (72.73%)
11 9203 bp 64.42 48.47 68.62
qh_10_scaffold_1136
Order: Halobacteriales (54.55%)
11 18671 bp 65.29 44.96 83.23
qh_10_scaffold_5887
Order: Halobacteriales (72.73%)
11 8073 bp 67.03 54.28 79.30
qh_10_scaffold_6718
Order: Halobacteriales (72.73%)
11 4397 bp 67.98 72.87 98.39
qh_10_scaffold_1600
Order: Halobacteriales (72.73%)
11 9960 bp 66.14 46.31 85.30
qh_10_scaffold_5922
Order: Halobacteriales (70%)
10 7457 bp 67.08 53.28 83.52
qh_10_scaffold_5959
Class: Halobacteria (60%)
10 6590 bp 64.89 42.89 90.00
qh_10_scaffold_10513
Order: Halobacteriales (60%)
10 7560 bp 63.41 63.24 83.06
qh_10_scaffold_1680
Species: halophilic archaeon J07HX64 (50%)
10 6380 bp 70.97 50.75 87.74
qh_10_scaffold_1659
Order: Halobacteriales (60%)
10 8671 bp 61.79 42.43 90.72
qh_10_scaffold_5777
Order: Halobacteriales (60%)
10 5661 bp 66.26 49.53 86.49
Displaying items 1-50 of 303 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.