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qh_10_scaffold_3163

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_10_scaffold_3163_1
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3..1025)
DNA (1023bp) protein (341aa)
cysteine desulfurase, SufS subfamily; K11717 cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] id=24647455 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Cysteine desulfurase {ECO:0000313|EMBL:ERH08592.1}; EC=2.8.1.7 {ECO:0000313|EMBL:ERH08592.1};; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archae
csd1; cysteine desulfurase (EC:4.4.1.-)
qh_10_scaffold_3163_2
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1134..1433)
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=halophilic archaeon J07HX5 RepID=U1MZY6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERG89770.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
hypothetical protein
qh_10_scaffold_3163_3
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1435..2190)
DNA (756bp) protein (252aa)
TPR repeat-containing protein id=24647550 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Tetratricopeptide repeat protein {ECO:0000313|EMBL:ERH08687.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
TPR repeat-containing protein
qh_10_scaffold_3163_4
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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2244..2801
DNA (558bp) protein (186aa)
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=1227488 species="A
2'-5' RNA ligase n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0CIP7_9EURY
2'-5' RNA ligase
qh_10_scaffold_3163_5

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3072..3224
DNA (153bp) protein (51aa)
Ribosomal protein L39e n=1 Tax=uncultured organism RepID=M1P2K2_9ZZZZ
Ribosomal protein L39e {ECO:0000313|EMBL:AGF93646.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
rpl39R; 50S ribosomal protein L39.eR
qh_10_scaffold_3163_6
Natronobacterium gregoryi, Natronobacterium, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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3221..3499
DNA (279bp) protein (93aa)
50S ribosomal protein L31e n=1 Tax=Natronobacterium gregoryi (strain ATCC 43098 / CCM 3738 / NCIMB 2189 / SP2) RepID=L0AG12_NATGS
ribosomal protein L31E
50S ribosomal protein L31e {ECO:0000256|HAMAP-Rule:MF_00410}; TaxID=797304 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronobacterium.;" source="Natronobacterium greg
qh_10_scaffold_3163_7
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3502..4170
DNA (669bp) protein (223aa)
translation initiation factor eIF-6; K03264 translation initiation factor 6 id=24644470 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Translation initiation factor 6 {ECO:0000256|HAMAP-Rule:MF_00032}; Short=aIF-6 {ECO:0000256|HAMAP-Rule:MF_00032};; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" sourc
translation initiation factor IF-6
qh_10_scaffold_3163_8
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4589..5236
DNA (648bp) protein (216aa)
Phytoene synthase {ECO:0000313|EMBL:ERH08693.1}; EC=2.5.1.32 {ECO:0000313|EMBL:ERH08693.1};; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon
Phytoene synthase n=1 Tax=halophilic archaeon J07HX64 RepID=U1QNP8_9EURY
squalene/phytoene synthase
qh_10_scaffold_3163_9
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5258..6157)
DNA (900bp) protein (300aa)
Carotene biosynthesis associated membrane protein n=1 Tax=halophilic archaeon J07HX5 RepID=U1P867_9EURY
Carotene biosynthesis associated membrane protein {ECO:0000313|EMBL:ERG89752.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
carotenoid biosynthesis protein
qh_10_scaffold_3163_10
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6150..6908)
DNA (759bp) protein (253aa)
UbiA prenyltransferase n=1 Tax=halophilic archaeon J07HX64 RepID=U1NZJ0_9EURY
UbiA prenyltransferase {ECO:0000313|EMBL:ERH09700.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
4-hydroxybenzoate polyprenyltransferase-like prenyltransferase
qh_10_scaffold_3163_11
unknown

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comp(6998..7357)
DNA (360bp) protein (120aa)

This feature has no annotations

qh_10_scaffold_3163_12
unknown

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comp(7421..7708)
DNA (288bp) protein (96aa)

This feature has no annotations

qh_10_scaffold_3163_13
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7790..8011
DNA (222bp) protein (74aa)
Electron transfer flavoprotein subunit beta n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CT73_9EURY
Electron transfer flavoprotein subunit beta {ECO:0000313|EMBL:ELZ25597.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosim
etfB2; electron transfer flavoprotein subunit beta
qh_10_scaffold_3163_14
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8014..9009
DNA (996bp) protein (332aa)
Electron transfer flavoprotein alpha subunit n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NZF2_HALMD
electron transfer flavoprotein subunit alpha
Electron transfer flavoprotein alpha subunit {ECO:0000313|EMBL:ACV48720.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halo
Displaying 14 items

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