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QH_2_UNK

In projects: QH_2  |  diaphorachaeota

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 20.77 Longest contig: 62.94 Kbp Bin length: 51.65 Mbp GC content: 61.28 %
Contigs count: 21073 Features count: 67835 rRNAs count: 15 tRNAs count: 624

Genome completeness

megabin RP 54 / 55 MC: 47 BSCG 45 / 51 MC: 42 ASCG 38 / 38 MC: 38
Displaying items 20651-20700 of 21073 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qh_2_scaffold_21178
Species: Natronococcus amylolyticus (100%)
2 1109 bp 67.72 8.21 100.36
qh_2_scaffold_45840
Species: Acidithrix ferrooxidans (50%)
2 1106 bp 72.97 7.50 100.36
qh_2_scaffold_21251
Species: Haloarcula argentinensis (50%)
2 1106 bp 71.52 12.84 100.36
qh_2_scaffold_21317
Species: Halosimplex carlsbadense (100%)
2 1103 bp 70.26 12.24 100.36
qh_2_scaffold_5990
Domain: Bacteria (50%)
4 3841 bp 43.66 5.83 100.36
qh_2_scaffold_21475
Species: Halosimplex carlsbadense (100%)
2 1097 bp 69.64 11.94 100.37
qh_2_scaffold_15785
Species: Natronorubrum bangense (100%)
2 1369 bp 70.49 8.91 100.37
qh_2_scaffold_21711
Species: Salinarchaeum sp. Harcht-Bsk1 (50%)
2 1088 bp 63.60 6.99 100.37
qh_2_scaffold_21786
Species: Haloterrigena thermotolerans (50%)
2 1085 bp 65.99 69.68 100.37
qh_2_scaffold_21811
Species: Halococcus morrhuae (50%)
2 1085 bp 63.23 14.47 100.37
qh_2_scaffold_44543
Species: Haloarcula californiae (50%)
2 1082 bp 72.92 12.11 100.37
qh_2_scaffold_16169
Species: Halovivax asiaticus (50%)
2 1345 bp 51.30 6.10 100.37
qh_2_scaffold_9785
Species: Haloferax sp. ATCC BAA-645 (50%)
2 1883 bp 50.56 13.81 100.37
qh_2_scaffold_22123 2 1073 bp 57.97 5.31 100.37
qh_2_scaffold_22214
Species: Halogeometricum borinquense (50%)
2 1070 bp 58.97 28.04 100.37
qh_2_scaffold_22317
Species: Halorubrum coriense (50%)
2 1067 bp 72.16 13.50 100.37
qh_2_scaffold_22321
Species: Natronomonas moolapensis (100%)
2 1067 bp 71.88 21.74 100.37
qh_2_scaffold_16400
Species: Halorhabdus utahensis (50%)
2 1333 bp 63.84 19.58 100.37
qh_2_scaffold_10044
Domain: Bacteria (100%)
3 1856 bp 58.46 15.09 100.38
qh_2_scaffold_16610
Species: Haliscomenobacter hydrossis (50%)
2 1321 bp 45.87 5.68 100.38
qh_2_scaffold_8141
Species: Halosimplex carlsbadense (75%)
4 2113 bp 68.81 17.79 100.38
qh_2_scaffold_12775
Species: Haloferax prahovense (100%)
2 1584 bp 50.88 6.00 100.38
qh_2_scaffold_22739
Species: Haloferax mucosum (50%)
2 1052 bp 62.45 9.51 100.38
qh_2_scaffold_16761
Species: Halorubrum coriense (50%)
2 1312 bp 65.78 19.28 100.38
qh_2_scaffold_9433
Class: Halobacteria (66.67%)
3 3147 bp 71.75 28.44 100.38
qh_2_scaffold_22917
Species: Natronomonas moolapensis (100%)
2 1046 bp 72.28 17.69 100.38
qh_2_scaffold_13084
Species: GWC2_Gemmatimonadetes_71_10_curated (50%)
2 1560 bp 63.59 16.22 100.38
qh_2_scaffold_16981
Species: Salinarchaeum sp. Harcht-Bsk1 (50%)
2 1300 bp 69.15 28.92 100.38
qh_2_scaffold_10388
Species: Natronolimnobius innermongolicus (50%)
2 1820 bp 61.43 6.81 100.38
qh_2_scaffold_23360
Species: Rhodothermus marinus (100%)
2 1031 bp 64.50 9.89 100.39
qh_2_scaffold_23376
Species: Haloarcula californiae (50%)
2 1031 bp 68.09 20.85 100.39
qh_2_scaffold_17558
Species: Kitasatospora setae (50%)
2 1784 bp 71.02 39.84 100.39
qh_2_scaffold_23728
Species: Natronomonas pharaonis (50%)
2 1019 bp 72.72 45.63 100.39
qh_2_scaffold_17662 3 1264 bp 65.27 10.52 100.40
qh_2_scaffold_24055
Species: Halalkalicoccus jeotgali (50%)
2 1010 bp 70.59 11.09 100.40
qh_2_scaffold_14694 2 2770 bp 55.56 6.17 100.40
qh_2_scaffold_24137
Species: Halostagnicola sp. A56 (50%)
2 1007 bp 69.81 6.36 100.40
qh_2_scaffold_24300
Species: Natronomonas pharaonis (50%)
2 1001 bp 75.72 34.67 100.40
qh_2_scaffold_11070
Species: Haloarcula vallismortis (50%)
2 1745 bp 69.86 14.67 100.40
qh_2_scaffold_10983
Order: Halobacteriales (60%)
5 2486 bp 64.84 13.03 100.40
qh_2_scaffold_14204
Species: Haloterrigena thermotolerans (100%)
2 1473 bp 73.52 10.73 100.41
qh_2_scaffold_14205
Species: Haloferax prahovense (50%)
2 1473 bp 55.33 8.55 100.41
qh_2_scaffold_31004
Class: Halobacteria (66.67%)
3 1718 bp 70.55 36.61 100.41
qh_2_scaffold_14387
Species: Halogranum salarium (50%)
2 2438 bp 68.54 10.79 100.41
qh_2_scaffold_6571
Species: Halosimplex carlsbadense (100%)
5 2420 bp 67.52 14.79 100.41
qh_2_scaffold_9551
Class: Halobacteria (66.67%)
3 1912 bp 71.76 29.55 100.42
qh_2_scaffold_14883 3 1425 bp 58.74 23.37 100.42
qh_2_scaffold_15027
Class: Halobacteria (66.67%)
3 1416 bp 67.66 12.64 100.42
qh_2_scaffold_12003
Species: Natronomonas pharaonis (66.67%)
3 1652 bp 54.66 5.08 100.42
qh_2_scaffold_32175 3 1416 bp 55.72 6.21 100.42
Displaying items 20651-20700 of 21073 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.