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QH_2_UNK

In projects: QH_2  |  diaphorachaeota

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 20.77 Longest contig: 62.94 Kbp Bin length: 51.65 Mbp GC content: 61.28 %
Contigs count: 21073 Features count: 67835 rRNAs count: 15 tRNAs count: 624

Genome completeness

megabin RP 54 / 55 MC: 47 BSCG 45 / 51 MC: 42 ASCG 38 / 38 MC: 38
Displaying items 20701-20750 of 21073 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qh_2_scaffold_15151
Species: Halococcus salifodinae (50%)
2 1407 bp 67.80 9.67 100.43
qh_2_scaffold_15268 3 1401 bp 67.45 11.49 100.43
qh_2_scaffold_8270
Species: Natronomonas pharaonis (60%)
5 2094 bp 65.71 13.85 100.43
qh_2_scaffold_6197
Genus: Halorubrum (50%)
4 3689 bp 67.42 37.48 100.43
qh_2_scaffold_15554
Species: halophilic archaeon DL31 (50%)
2 1383 bp 71.37 12.44 100.43
qh_2_scaffold_7761
Species: Halogeometricum borinquense (75%)
4 2996 bp 61.42 8.04 100.43
qh_2_scaffold_20421
Species: Haloarcula japonica (50%)
2 1138 bp 64.15 8.44 100.44
qh_2_scaffold_10464
Species: Natrinema pallidum (50%)
2 1810 bp 63.59 12.27 100.44
qh_2_scaffold_10486
Class: Halobacteria (66.67%)
3 1807 bp 56.83 5.92 100.44
qh_2_scaffold_16131
Species: Natronomonas pharaonis (66.67%)
3 1347 bp 67.26 16.48 100.45
qh_2_scaffold_25875
Domain: Archaea (66.67%)
3 1571 bp 74.16 11.78 100.45
qh_2_scaffold_12973
Species: Candidatus Halobonum tyrrellensis (50%)
2 1568 bp 70.41 15.75 100.45
qh_2_scaffold_17259
Species: Natrinema pallidum (100%)
2 2013 bp 53.20 12.97 100.45
qh_2_scaffold_16527
Species: Natronomonas moolapensis (50%)
2 1326 bp 67.65 17.65 100.45
qh_2_scaffold_21409
Species: Natrinema pellirubrum (50%)
2 1099 bp 70.06 38.13 100.46
qh_2_scaffold_21421
Species: Haladaptatus paucihalophilus (50%)
2 1099 bp 68.88 9.19 100.46
qh_2_scaffold_5654 5 2637 bp 61.70 7.13 100.46
qh_2_scaffold_25270
Species: Natronomonas moolapensis (100%)
2 1753 bp 54.99 12.66 100.46
qh_2_scaffold_7318
Order: Haloferacales (66.67%)
3 2822 bp 66.02 9.07 100.46
qh_2_scaffold_22070
Class: Halobacteria (66.67%)
3 1075 bp 58.23 9.21 100.47
qh_2_scaffold_7467
Phylum: Bacteroidetes (50%)
4 2765 bp 61.77 8.90 100.47
qh_2_scaffold_12456 3 2126 bp 55.83 7.29 100.47
qh_2_scaffold_8089
Species: Natronomonas moolapensis (75%)
4 2120 bp 77.55 58.21 100.47
qh_2_scaffold_26024
Species: Halarchaeum acidiphilum (66.67%)
3 1469 bp 60.72 13.27 100.48
qh_2_scaffold_22973
Species: halophilic archaeon J07HB67 (50%)
2 1045 bp 71.96 16.17 100.48
qh_2_scaffold_11851
Species: R_Deltaproteobacteria_46_8 (50%)
2 1666 bp 60.68 4.14 100.48
qh_2_scaffold_23143
Species: Halorubrum litoreum (50%)
2 1039 bp 46.87 3.56 100.48
qh_2_scaffold_7365
Phylum: Bacteroidetes (66.67%)
3 2248 bp 66.73 14.55 100.49
qh_2_scaffold_12450
Species: Haladaptatus paucihalophilus (100%)
2 1612 bp 67.12 10.79 100.50
qh_2_scaffold_12495
Species: Natronomonas moolapensis (50%)
2 1609 bp 56.37 15.35 100.50
qh_2_scaffold_19959
Species: Indibacter alkaliphilus (50%)
2 2000 bp 66.50 12.05 100.50
qh_2_scaffold_19036
Species: Natronorubrum bangense (66.67%)
3 1197 bp 56.81 8.60 100.50
qh_2_scaffold_3672
Species: Listeriaceae bacterium FSL A5-0209 (50%)
2 3391 bp 66.91 56.44 100.50
qh_2_scaffold_19105 3 1194 bp 40.03 8.04 100.50
qh_2_scaffold_29434
Species: Hymenobacter swuensis (100%)
2 1373 bp 54.33 4.52 100.51
qh_2_scaffold_19506
Species: Natronomonas moolapensis (100%)
3 1176 bp 70.66 28.49 100.51
qh_2_scaffold_9620
Genus: Halococcus (80%)
5 2546 bp 68.54 16.65 100.51
qh_2_scaffold_16393
Species: Haloferax larsenii (50%)
2 1334 bp 58.10 25.19 100.52
qh_2_scaffold_20363
Genus: Haloferax (100%)
3 1140 bp 68.95 10.53 100.53
qh_2_scaffold_36314
Species: Salinibacter ruber (50%)
4 1322 bp 64.15 41.23 100.53
qh_2_scaffold_16655 3 1319 bp 50.49 5.38 100.53
qh_2_scaffold_30425
Species: Natronomonas pharaonis (100%)
2 1316 bp 71.05 19.30 100.53
qh_2_scaffold_10100
Species: Halorubrum tebenquichense (50%)
2 1850 bp 73.95 20.76 100.54
qh_2_scaffold_17151
Genus: Haloterrigena (66.67%)
3 1292 bp 69.04 32.43 100.54
qh_2_scaffold_10240
Species: Natronomonas moolapensis (66.67%)
3 1835 bp 78.09 62.67 100.55
qh_2_scaffold_17317
Species: Natronomonas pharaonis (50%)
2 1283 bp 69.84 43.02 100.55
qh_2_scaffold_21513 2 1095 bp 61.28 6.12 100.55
qh_2_scaffold_17644
Species: Halogeometricum borinquense (50%)
2 1265 bp 71.78 16.76 100.55
qh_2_scaffold_7836
Species: Halomicrobium mukohataei (50%)
2 2163 bp 70.09 10.22 100.55
qh_2_scaffold_14831
Species: RBG_16_KB1_OP1_55_9_curated (50%)
2 1429 bp 56.54 5.60 100.56
Displaying items 20701-20750 of 21073 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.