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QH_2_UNK

In projects: QH_2  |  diaphorachaeota

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 20.77 Longest contig: 62.94 Kbp Bin length: 51.65 Mbp GC content: 61.28 %
Contigs count: 21073 Features count: 67835 rRNAs count: 15 tRNAs count: 624

Genome completeness

megabin RP 54 / 55 MC: 47 BSCG 45 / 51 MC: 42 ASCG 38 / 38 MC: 38
Displaying items 20751-20800 of 21073 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qh_2_scaffold_22196
Species: Natronomonas pharaonis (50%)
2 1071 bp 71.24 30.44 100.56
qh_2_scaffold_22458
Species: Halococcus hamelinensis (50%)
2 1062 bp 59.32 7.16 100.57
qh_2_scaffold_18276
Species: Cylindrospermum stagnale (50%)
2 1232 bp 48.30 50.32 100.57
qh_2_scaffold_18354
Species: Natrialba asiatica (50%)
2 1229 bp 64.36 8.06 100.57
qh_2_scaffold_15754
Phylum: Proteobacteria (66.67%)
3 1927 bp 58.59 5.45 100.57
qh_2_scaffold_18427
Species: Natronomonas pharaonis (50%)
2 1226 bp 73.57 23.33 100.57
qh_2_scaffold_22821
Species: Natronomonas pharaonis (100%)
2 1050 bp 68.00 21.81 100.57
qh_2_scaffold_22996
Species: Rhodothermus marinus (100%)
2 1044 bp 67.91 7.38 100.57
qh_2_scaffold_11689
Species: Salinibacter ruber (66.67%)
3 3293 bp 66.99 78.38 100.58
qh_2_scaffold_11209
Class: Halobacteria (100%)
3 1730 bp 66.47 13.18 100.58
qh_2_scaffold_16406
Class: Halobacteria (66.67%)
3 2249 bp 68.30 12.72 100.58
qh_2_scaffold_15587
Species: Halococcus salifodinae (100%)
2 1381 bp 67.99 12.96 100.58
qh_2_scaffold_23257 4 1035 bp 51.88 6.57 100.58
qh_2_scaffold_9677
Species: sediment metagenome (66.67%)
3 1897 bp 63.21 37.64 100.58
qh_2_scaffold_20587
Species: Natrinema gari (50%)
2 2067 bp 45.57 6.29 100.58
qh_2_scaffold_23333
Species: Salinarchaeum sp. Harcht-Bsk1 (50%)
2 1032 bp 56.69 4.55 100.58
qh_2_scaffold_11730
Species: Salinibacter ruber (100%)
4 2905 bp 63.24 86.49 100.59
qh_2_scaffold_20302 2 1879 bp 56.04 5.59 100.59
qh_2_scaffold_11544
Species: Halobacterium sp. DL1 (66.67%)
3 1697 bp 66.59 10.55 100.59
qh_2_scaffold_13512
Species: Natronomonas pharaonis (66.67%)
3 1527 bp 69.55 25.34 100.59
qh_2_scaffold_19247
Species: Natronomonas moolapensis (66.67%)
3 1187 bp 70.60 52.74 100.59
qh_2_scaffold_23925
Class: Halobacteria (66.67%)
3 1014 bp 61.34 6.11 100.59
qh_2_scaffold_32911
Species: Natronomonas moolapensis (66.67%)
3 1831 bp 72.86 55.43 100.60
qh_2_scaffold_30405
Genus: Natronomonas (66.67%)
3 1324 bp 69.56 11.18 100.60
qh_2_scaffold_9040
Order: Halobacteriales (75%)
4 1983 bp 68.78 10.09 100.61
qh_2_scaffold_20035
Species: Halobacterium sp. DL1 (50%)
2 1154 bp 60.05 18.46 100.61
qh_2_scaffold_2380
Species: Halorhabdus utahensis (100%)
2 4282 bp 63.57 27.91 100.61
qh_2_scaffold_16708 3 1315 bp 63.27 6.01 100.61
qh_2_scaffold_20462
Species: Haladaptatus paucihalophilus (66.67%)
3 1136 bp 67.17 9.24 100.62
qh_2_scaffold_20480
Species: halophilic archaeon DL31 (50%)
2 1136 bp 60.83 6.16 100.62
qh_2_scaffold_17695
Domain: Viruses (75%)
4 1774 bp 51.13 7.10 100.62
qh_2_scaffold_36850
Species: Halorhabdus tiamatea (100%)
3 1288 bp 59.08 12.97 100.62
qh_2_scaffold_12836 4 1580 bp 52.66 16.90 100.63
qh_2_scaffold_21321
Genus: Haloarcula (66.67%)
3 1103 bp 65.91 8.79 100.64
qh_2_scaffold_32392
Species: Halosimplex carlsbadense (100%)
3 1568 bp 68.56 15.94 100.64
qh_2_scaffold_39730
Species: Halosimplex carlsbadense (100%)
2 1097 bp 71.01 32.27 100.64
qh_2_scaffold_21716
Species: Halorubrum tebenquichense (50%)
2 1088 bp 73.35 17.74 100.64
qh_2_scaffold_21799
Species: Halococcus salifodinae (50%)
2 1085 bp 65.90 7.47 100.65
qh_2_scaffold_11481
Species: Haloarcula hispanica (50%)
2 1702 bp 66.22 13.10 100.65
qh_2_scaffold_11482
Species: Haloferax prahovense (50%)
2 1702 bp 60.99 8.70 100.65
qh_2_scaffold_30329
Species: marine sediment metagenome (50%)
2 1392 bp 55.82 6.32 100.65
qh_2_scaffold_19163
Order: Halobacteriales (66.67%)
3 1192 bp 67.11 7.55 100.67
qh_2_scaffold_23032
Species: Methanocaldococcus infernus (50%)
2 1043 bp 35.67 5.27 100.67
qh_2_scaffold_7708 3 4619 bp 51.16 6.58 100.67
qh_2_scaffold_10763 2 1776 bp 55.12 5.97 100.68
qh_2_scaffold_19329
Species: Halogeometricum borinquense (50%)
2 1183 bp 72.19 23.25 100.68
qh_2_scaffold_23378
Species: halophilic archaeon J07HX64 (66.67%)
3 1031 bp 69.84 6.98 100.68
qh_2_scaffold_23453 2 1028 bp 51.07 5.35 100.68
qh_2_scaffold_23611
Species: Halosimplex carlsbadense (83.33%)
6 2482 bp 66.56 11.08 100.69
qh_2_scaffold_10893
Species: Halococcus salifodinae (50%)
4 2917 bp 71.68 11.96 100.69
Displaying items 20751-20800 of 21073 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.