ggKbase home page
Advanced Search
Search Help

QH_7_Bacteroidetes_Order_II__Incertae_sedis_67_15

In projects: QH_7

Consensus taxonomy: Bacteroidetes Order II. Incertae sedis  →  Bacteroidetes  →  Bacteria

Taxonomy override: Bacteroidetes

Metagenomic Context

Parent: QH_7_UNK

Properties

Avg. coverage: 14.71 Longest contig: 39.87 Kbp Bin length: 2.27 Mbp GC content: 67.41 %
Contigs count: 249 Features count: 2124 rRNAs count: 1 tRNAs count: 32

Genome completeness

partial RP 44 / 55 MC: 2 BSCG 40 / 51 ASCG 13 / 38
Displaying items 1-50 of 249 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qh_7_scaffold_428
Order: Bacteroidetes Order II. Incertae sedis (65.12%)
43 39874 bp 67.56 14.02 85.16
qh_7_scaffold_362
Species: Salinibacter ruber (60%)
30 18229 bp 63.46 14.45 83.01
qh_7_scaffold_434
Domain: Bacteria (92.86%)
28 38385 bp 67.90 17.00 89.52
qh_7_scaffold_1824
Order: Bacteroidetes Order II. Incertae sedis (65.22%)
23 25174 bp 68.01 13.78 85.84
qh_7_scaffold_364
Domain: Bacteria (73.91%)
23 34227 bp 67.19 16.66 84.12
qh_7_scaffold_898
Species: Salinibacter ruber (59.09%)
22 25669 bp 65.50 14.55 87.68
qh_7_scaffold_958
Species: Salinibacter ruber (57.14%)
21 20213 bp 67.37 15.36 82.99
qh_7_scaffold_659
Species: Salinibacter ruber (57.14%)
21 21351 bp 66.99 14.06 74.26
qh_7_scaffold_694
Order: Bacteroidetes Order II. Incertae sedis (76.19%)
21 23485 bp 69.01 14.83 86.77
qh_7_scaffold_864
Species: Salinibacter ruber (55%)
20 26602 bp 67.37 14.57 88.12
qh_7_scaffold_1467
Order: Bacteroidetes Order II. Incertae sedis (52.63%)
19 17954 bp 66.96 14.46 70.31
qh_7_scaffold_305
Order: Bacteroidetes Order II. Incertae sedis (57.89%)
19 21474 bp 68.10 14.28 88.94
qh_7_scaffold_693
Species: Salinibacter ruber (50%)
18 19778 bp 67.62 14.65 85.53
qh_7_scaffold_2676
Order: Bacteroidetes Order II. Incertae sedis (72.22%)
18 18544 bp 66.85 14.30 78.51
qh_7_scaffold_488
Phylum: Bacteroidetes (50%)
18 19047 bp 67.07 16.39 84.64
qh_7_scaffold_1509
Order: Bacteroidetes Order II. Incertae sedis (72.22%)
18 17987 bp 67.80 18.44 81.78
qh_7_scaffold_376
Order: Bacteroidetes Order II. Incertae sedis (64.71%)
17 21286 bp 67.39 14.58 83.98
qh_7_scaffold_580
Order: Bacteroidetes Order II. Incertae sedis (64.71%)
17 22220 bp 67.47 14.83 75.57
qh_7_scaffold_793
Phylum: Bacteroidetes (50%)
16 15193 bp 64.57 16.34 90.24
qh_7_scaffold_1155
Order: Bacteroidetes Order II. Incertae sedis (75%)
16 14531 bp 67.37 14.65 87.45
qh_7_scaffold_262
Order: Bacteroidetes Order II. Incertae sedis (56.25%)
16 18501 bp 68.66 14.93 81.74
qh_7_scaffold_1480
Species: Rhodothermus marinus (50%)
16 17304 bp 65.61 13.37 77.25
qh_7_scaffold_578
Order: Bacteroidetes Order II. Incertae sedis (56.25%)
16 17319 bp 67.92 14.17 83.44
qh_7_scaffold_1118
Phylum: Bacteroidetes (60%)
15 12754 bp 67.12 14.49 78.56
qh_7_scaffold_1552
Species: Salinibacter ruber (53.33%)
15 15560 bp 67.06 14.42 81.52
qh_7_scaffold_370
Order: Bacteroidetes Order II. Incertae sedis (73.33%)
15 17099 bp 68.80 21.02 89.72
qh_7_scaffold_355
Order: Bacteroidetes Order II. Incertae sedis (60%)
15 16048 bp 66.55 13.75 83.13
qh_7_scaffold_642
Order: Bacteroidetes Order II. Incertae sedis (73.33%)
15 15916 bp 67.82 14.28 90.59
qh_7_scaffold_409
Domain: Bacteria (100%)
15 13397 bp 66.63 26.61 85.30
qh_7_scaffold_2315
Domain: Bacteria (80%)
15 11530 bp 66.91 14.93 80.71
qh_7_scaffold_722
Order: Bacteroidetes Order II. Incertae sedis (50%)
14 16060 bp 66.71 13.75 88.69
qh_7_scaffold_1304
Order: Bacteroidetes Order II. Incertae sedis (64.29%)
14 12420 bp 69.16 13.98 87.29
qh_7_scaffold_1765
Domain: Bacteria (78.57%)
14 16109 bp 65.73 14.07 77.44
qh_7_scaffold_1822
Species: Salinibacter ruber (64.29%)
14 15690 bp 66.97 16.39 78.89
qh_7_scaffold_2251
Species: Salinibacter ruber (71.43%)
14 16592 bp 66.18 13.90 85.74
qh_7_scaffold_1827
Order: Bacteroidetes Order II. Incertae sedis (50%)
14 14675 bp 66.75 12.76 80.55
qh_7_scaffold_3660
Species: Salinibacter ruber (57.14%)
14 13796 bp 66.29 14.28 78.70
qh_7_scaffold_1598
Order: Bacteroidetes Order II. Incertae sedis (53.85%)
13 13114 bp 68.56 13.25 88.01
qh_7_scaffold_1261
Phylum: Bacteroidetes (61.54%)
13 17002 bp 67.10 14.88 88.12
qh_7_scaffold_1720
Order: Bacteroidetes Order II. Incertae sedis (53.85%)
13 21255 bp 68.48 14.87 87.83
qh_7_scaffold_1938
Domain: Bacteria (76.92%)
13 13413 bp 67.05 15.32 85.75
qh_7_scaffold_828
Species: Salinibacter ruber (76.92%)
13 16925 bp 68.39 15.13 84.44
qh_7_scaffold_1413
Order: Bacteroidetes Order II. Incertae sedis (53.85%)
13 13583 bp 66.90 14.58 85.83
qh_7_scaffold_891
Order: Bacteroidetes Order II. Incertae sedis (53.85%)
13 16541 bp 67.46 14.96 86.29
qh_7_scaffold_1278
Order: Bacteroidetes Order II. Incertae sedis (53.85%)
13 13308 bp 64.31 14.33 78.78
qh_7_scaffold_1073
Order: Bacteroidetes Order II. Incertae sedis (58.33%)
12 7926 bp 66.39 14.29 75.30
qh_7_scaffold_883
Order: Bacteroidetes Order II. Incertae sedis (58.33%)
12 11083 bp 65.33 15.18 81.42
qh_7_scaffold_528
Species: Rhodothermus marinus (50%)
12 17708 bp 68.05 14.84 87.82
qh_7_scaffold_1664
Domain: Bacteria (58.33%)
12 13858 bp 68.02 13.72 83.24
qh_7_scaffold_1295
Order: Bacteroidetes Order II. Incertae sedis (50%)
12 16028 bp 67.03 15.49 83.29
Displaying items 1-50 of 249 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.