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qh_7_scaffold_642

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Displaying 15 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_7_scaffold_642_1
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1..963)
DNA (963bp) protein (321aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MI20_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA44060.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qh_7_scaffold_642_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(1040..1774)
DNA (735bp) protein (245aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:000
threonyl-tRNA synthetase n=1 Tax=Salisaeta longa RepID=UPI0003B43538
thrS; threonyl-tRNA synthetase, class IIa
qh_7_scaffold_642_3
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(1771..2943)
DNA (1173bp) protein (391aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:000
Threonine--tRNA ligase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SFU8_RHOMR
threonyl-tRNA synthetase
qh_7_scaffold_642_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(3014..3568)
DNA (555bp) protein (185aa)
hypothetical protein
hypothetical protein id=24658157 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH25361.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_7_scaffold_642_5
unknown

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3809..4231
DNA (423bp) protein (141aa)

This feature has no annotations

qh_7_scaffold_642_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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4365..5588
DNA (1224bp) protein (408aa)
Oxidoreductase, FAD-binding n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H716_SALRM
oxidoreductase, FAD-binding
Oxidoreductase, FAD-binding {ECO:0000313|EMBL:CBH23821.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter
qh_7_scaffold_642_7
RLO_RIF_OD1_05_38_22, RIF-OD1-5, Parcubacteria, Bacteria

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5741..6148
DNA (408bp) protein (136aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_OD1_05_38_22_curated
qh_7_scaffold_642_8
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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6227..7315
DNA (1089bp) protein (363aa)
Transcriptional regulator, LacI family n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SGB3_RHOMR
LacI family transcriptional regulator
Transcriptional regulator, LacI family {ECO:0000313|EMBL:AEN73314.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rh
qh_7_scaffold_642_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(7350..8822)
DNA (1473bp) protein (491aa)
Glutamate dehydrogenase, short peptide n=2 Tax=Salinibacter ruber RepID=Q2S0C1_SALRD
glutamate dehydrogenase
Glutamate dehydrogenase, short peptide {ECO:0000313|EMBL:ABC44728.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sa
qh_7_scaffold_642_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

9263..10009
DNA (747bp) protein (249aa)
serine/threonine protein phosphatase family protein; K03269 UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] id=24657553 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
serine/threonine protein phosphatase family protein
Ser/Thr protein phosphatase superfamily {ECO:0000313|EMBL:ABC44365.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="S
qh_7_scaffold_642_11
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

10091..12796
DNA (2706bp) protein (902aa)
penicillin-binding protein (EC:2.4.1.129)
Penicillin-binding protein, 1A family {ECO:0000313|EMBL:ACY47180.1}; EC=2.4.1.129 {ECO:0000313|EMBL:ACY47180.1};; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis;
Penicillin-binding protein, 1A family n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SFN4_RHOMR
qh_7_scaffold_642_12
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

12874..14130
DNA (1257bp) protein (419aa)
Nuclease SbcCD, D subunit n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SFN3_RHOMR
nuclease SbcCD, D subunit
Nuclease SbcCD, D subunit {ECO:0000313|EMBL:AEN72203.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus ma
qh_7_scaffold_642_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

14166..14819
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H6Y0_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH23785.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qh_7_scaffold_642_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

14965..15822
DNA (858bp) protein (286aa)
recJ; single-stranded-DNA-specific exonuclease RecJ; K07462 single-stranded-DNA-specific exonuclease [EC:3.1.-.-] id=24658177 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Single-stranded-DNA-specific exonuclease RecJ {ECO:0000313|EMBL:ABC45534.1}; EC=3.1.-.- {ECO:0000313|EMBL:ABC45534.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae
recJ; single-stranded-DNA-specific exonuclease RecJ
qh_7_scaffold_642_15
unknown

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comp(15764..15916)
DNA (153bp) protein (51aa)

This feature has no annotations

Displaying 15 items

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