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QH_7_Halobacteriales_66_37

QH_7_Halobacteriales_67_40
In projects: QH_7  |  diaphorachaeota  |  archaea_ggkbase

Consensus taxonomy: Halobacteriales  →  Halobacteria  →  Euryarchaeota  →  Archaea

Taxonomy override: Euryarchaeota

Metagenomic Context

Parent: QH_7_UNK

Properties

Avg. coverage: 39.65 Longest contig: 35.57 Kbp Bin length: 1.71 Mbp GC content: 66.64 %
Contigs count: 269 Features count: 1926 rRNAs count: 0 tRNAs count: 19

Genome completeness

partial RP 32 / 55 MC: 4 BSCG 17 / 51 MC: 1 ASCG 28 / 38 MC: 3
Displaying items 1-50 of 269 in total
contig # features sequence size GC content (%) Cov Coding Density (%) notes
qh_7_scaffold_168
Class: Halobacteria (76.47%)
34 35567 bp 66.59 26.33 87.50
qh_7_scaffold_1237
Order: Halobacteriales (84.62%)
26 15177 bp 67.63 60.06 98.30
qh_7_scaffold_501
Order: Halobacteriales (55%)
20 18745 bp 67.48 40.84 88.54
qh_7_scaffold_775
Order: Halobacteriales (52.63%)
19 22595 bp 67.32 44.70 90.22
qh_7_scaffold_423
Order: Halobacteriales (57.89%)
19 16046 bp 65.82 36.57 82.24
qh_7_scaffold_1109
Order: Halobacteriales (50%)
18 13414 bp 70.02 52.04 90.67
qh_7_scaffold_1776
Order: Halobacteriales (58.82%)
17 13548 bp 66.16 46.56 79.92
qh_7_scaffold_4598
Order: Halobacteriales (50%)
16 14726 bp 68.49 42.29 83.89
qh_7_scaffold_3073
Order: Halobacteriales (80%)
15 13313 bp 67.47 39.26 86.53
qh_7_scaffold_166
Order: Natrialbales (80%)
15 22486 bp 68.02 35.20 96.19
qh_7_scaffold_4271
Order: Halobacteriales (93.33%)
15 11286 bp 64.54 40.71 85.86
qh_7_scaffold_2803
Order: Halobacteriales (73.33%)
15 11318 bp 68.21 40.92 91.92
qh_7_scaffold_491
Class: Halobacteria (78.57%)
14 13519 bp 67.30 34.88 81.86
qh_7_scaffold_3133
Order: Halobacteriales (78.57%)
14 6156 bp 67.37 60.28 95.32
qh_7_scaffold_1502
Class: Halobacteria (85.71%)
14 13381 bp 66.71 40.37 81.05
qh_7_scaffold_612
Order: Halobacteriales (53.85%)
13 14434 bp 66.29 43.29 91.97
qh_7_scaffold_3179
Order: Halobacteriales (53.85%)
13 11544 bp 66.85 34.69 89.86
qh_7_scaffold_2186
Order: Halobacteriales (69.23%)
13 11002 bp 67.48 44.62 86.47
qh_7_scaffold_1614
Order: Halobacteriales (84.62%)
13 10419 bp 66.17 40.13 89.06
qh_7_scaffold_741
Class: Halobacteria (53.85%)
13 13926 bp 68.26 47.41 89.51
qh_7_scaffold_4123
Class: Halobacteria (69.23%)
13 8326 bp 62.85 27.62 73.83
qh_7_scaffold_1807
Order: Halobacteriales (50%)
12 9498 bp 65.86 39.97 86.67
qh_7_scaffold_4507
Order: Halobacteriales (66.67%)
12 8312 bp 65.64 41.38 91.75
qh_7_scaffold_4982
Order: Halobacteriales (66.67%)
12 10356 bp 69.26 45.73 70.39
qh_7_scaffold_1896
Order: Halobacteriales (50%)
12 8094 bp 64.33 29.86 90.85
qh_7_scaffold_2064
Order: Halobacteriales (66.67%)
12 11574 bp 68.14 54.09 91.76
qh_7_scaffold_7849
Order: Halobacteriales (91.67%)
12 8280 bp 66.00 54.80 77.61
qh_7_scaffold_1615
Class: Halobacteria (66.67%)
12 9462 bp 67.72 40.32 85.13
qh_7_scaffold_2832
Order: Halobacteriales (63.64%)
11 9504 bp 67.45 47.43 92.30
qh_7_scaffold_5403
Order: Halobacteriales (54.55%)
11 7571 bp 65.82 37.46 78.71
qh_7_scaffold_1977
Class: Halobacteria (81.82%)
11 9548 bp 67.62 38.59 90.43
qh_7_scaffold_5206
Order: Halobacteriales (63.64%)
11 8338 bp 65.48 43.34 76.85
qh_7_scaffold_640
Order: Halobacteriales (100%)
11 10802 bp 66.41 29.34 89.09
qh_7_scaffold_1086
Order: Halobacteriales (54.55%)
11 10484 bp 66.93 36.75 88.71
qh_7_scaffold_3931
Order: Halobacteriales (81.82%)
11 11019 bp 64.44 40.78 79.55
qh_7_scaffold_2917
Order: Halobacteriales (63.64%)
11 14939 bp 64.36 35.30 75.07
qh_7_scaffold_1924
Order: Halobacteriales (81.82%)
11 10431 bp 66.45 39.59 88.29
qh_7_scaffold_3640
Order: Halobacteriales (72.73%)
11 9503 bp 63.72 42.68 86.15
qh_7_scaffold_1025
Order: Natrialbales (54.55%)
11 10205 bp 64.84 30.01 86.72
qh_7_scaffold_1463
Class: Halobacteria (72.73%)
11 10975 bp 66.31 31.57 71.75
qh_7_scaffold_2939
Order: Halobacteriales (90%)
10 10589 bp 70.52 42.57 88.76
qh_7_scaffold_6534
Order: Halobacteriales (60%)
10 11569 bp 65.55 33.31 73.39
qh_7_scaffold_2463
Order: Halobacteriales (60%)
10 10660 bp 67.69 40.83 86.68
qh_7_scaffold_3396
Class: Halobacteria (80%)
10 10648 bp 66.84 51.99 87.20
qh_7_scaffold_2956
Class: Halobacteria (60%)
10 7378 bp 66.02 36.36 84.17
qh_7_scaffold_3848
Order: Halobacteriales (70%)
10 6623 bp 65.54 33.38 81.31
qh_7_scaffold_1623
Order: Natrialbales (70%)
10 8036 bp 66.21 47.06 95.27
qh_7_scaffold_3154
Order: Halobacteriales (70%)
10 7837 bp 67.50 51.45 83.95
qh_7_scaffold_6610
Class: Halobacteria (50%)
10 6755 bp 65.26 37.82 83.40
qh_7_scaffold_7532
Class: Halobacteria (90%)
10 8541 bp 68.52 47.84 79.49
Displaying items 1-50 of 269 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.