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qh_7_scaffold_3133

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qh_7_scaffold_3133_trna_1
unknown

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50..132
DNA (83bp)
transferRNA
qh_7_scaffold_3133_1
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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152..673
DNA (522bp) protein (174aa)
30S ribosomal protein S13 n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PFE3_9EURY
30S ribosomal protein S18e (S13p)
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus tiamatea
qh_7_scaffold_3133_2
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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675..1199
DNA (525bp) protein (175aa)
30S ribosomal protein S4 n=1 Tax=halophilic archaeon J07HX64 RepID=U1QVJ9_9EURY
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306, ECO:0000256|SAAS:SAAS00016650}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J
rps4p; 30S ribosomal protein S4P
qh_7_scaffold_3133_3
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1200..1583
DNA (384bp) protein (128aa)
30S ribosomal protein S11 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CSH1_9EURY
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbade
rps11p; 30S ribosomal protein S11P
qh_7_scaffold_3133_4
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1586..2128
DNA (543bp) protein (181aa)
DNA-directed RNA polymerase subunit D {ECO:0000256|HAMAP-Rule:MF_00320}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00320};; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal
DNA-directed RNA polymerase subunit D n=1 Tax=Halomicrobium katesii RepID=UPI000374F7AD
RNA polymerase insert
qh_7_scaffold_3133_5
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2125..2259
DNA (135bp) protein (45aa)
rpoD; DNA-directed RNA polymerase subunit D (EC:2.7.7.6); K03047 DNA-directed RNA polymerase subunit D [EC:2.7.7.6] id=24645656 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
DNA-directed RNA polymerase subunit D (EC:2.7.7.6)
DNA-directed RNA polymerase, alpha subunit/40 kD subunit {ECO:0000313|EMBL:ERH09875.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07H
qh_7_scaffold_3133_trna_2
unknown

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2389..2473
DNA (85bp)
transferRNA
qh_7_scaffold_3133_6
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2492..2842
DNA (351bp) protein (117aa)
50S ribosomal protein L18e n=9 Tax=Haloarcula RepID=RL18E_HALMA
50S ribosomal protein L18
50S ribosomal protein L18e {ECO:0000256|HAMAP-Rule:MF_00329, ECO:0000256|RuleBase:RU000573}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.
qh_7_scaffold_3133_7
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2839..3279
DNA (441bp) protein (147aa)
50S ribosomal protein L13 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CQT4_9EURY
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbade
rpl13p; 50S ribosomal protein L13
qh_7_scaffold_3133_8
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3273..3674
DNA (402bp) protein (134aa)
30S ribosomal protein S9 n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NZ12_HALMD
rps9p; 30S ribosomal protein S9
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003817}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.
qh_7_scaffold_3133_9
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3679..3879
DNA (201bp) protein (67aa)
DNA-directed RNA polymerase subunit N (EC:2.7.7.6) id=24648746 bin=uncultivated_archaeon_J07ABHX6 species=Salinarchaeum sp. Harcht-Bsk1 genus=Salinarchaeum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
DNA-directed RNA polymerase subunit N {ECO:0000256|HAMAP-Rule:MF_00250}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00250};; TaxID=1417673 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Ha
DNA-directed RNA polymerase subunit N
qh_7_scaffold_3133_10
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3882..4061
DNA (180bp) protein (60aa)
RNA polymerase Rpb6; K03055 DNA-directed RNA polymerase subunit K [EC:2.7.7.6] id=24655919 bin=uncultured_archaeon_J07HX5 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultured_archaeon_J07HX5
DNA-directed RNA polymerase subunit K {ECO:0000256|HAMAP-Rule:MF_00192}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00192};; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;"
rpoK; DNA-directed RNA polymerase subunit K (EC:2.7.7.6)
qh_7_scaffold_3133_11
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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4058..5260
DNA (1203bp) protein (401aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318, ECO:0000313|EMBL:EMA27940.1}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318, ECO:0000313|EMBL:EMA27940.1};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMA
enolase (EC:4.2.1.11)
Enolase n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0L7L4_9EURY
qh_7_scaffold_3133_12
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5257..6069
DNA (813bp) protein (271aa)
30S ribosomal protein S2 n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KLV7_9EURY
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291, ECO:0000256|SAAS:SAAS00012212}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;"
30S ribosomal protein S2
Displaying 14 items

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