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QS_1_Euk_56_21

QS_1_unknown_55_22
In projects: QS_1

Consensus taxonomy:

Taxonomy override: Eukaryote

Metagenomic Context

Parent: QS_1_UNK

Properties

Avg. coverage: 21.81 Longest contig: 84.87 Kbp Bin length: 10.86 Mbp GC content: 55.46 %
Contigs count: 895 Features count: 10685 rRNAs count: 2 tRNAs count: 29

Genome completeness

megabin RP 45 / 55 MC: 34 BSCG 41 / 51 MC: 19 ASCG 27 / 38 MC: 10
Displaying items 551-600 of 896 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qs_1_scaffold_1552 17 16658 bp 56.18 20.98 72.61
qs_1_scaffold_776 11 14310 bp 54.28 20.19 72.52
qs_1_scaffold_1993 14 12569 bp 53.93 20.57 72.51
qs_1_scaffold_5029 3 4108 bp 54.07 20.86 72.44
qs_1_scaffold_4196 12 5749 bp 55.61 20.59 72.43
qs_1_scaffold_1784 9 12151 bp 54.46 21.87 72.36
qs_1_scaffold_5579 8 7160 bp 53.97 20.21 72.32
qs_1_scaffold_2233 15 12779 bp 54.78 22.23 72.28
qs_1_scaffold_2452
Order: Mamiellales (50%)
6 6509 bp 54.56 21.25 72.27
qs_1_scaffold_1787 12 7983 bp 55.13 20.47 72.27
qs_1_scaffold_912 22 22910 bp 55.74 20.31 72.24
qs_1_scaffold_1318 24 16549 bp 55.28 21.91 72.22
qs_1_scaffold_716 17 13994 bp 56.16 20.61 72.20
qs_1_scaffold_33477
Species: Capitella teleta (50%)
2 1280 bp 55.63 36.33 72.19
qs_1_scaffold_1106
Phylum: Chlorophyta (50%)
6 10868 bp 55.16 21.59 72.13
qs_1_scaffold_654 26 24882 bp 55.83 21.01 72.10
qs_1_scaffold_676 19 20408 bp 54.49 22.30 72.05
qs_1_scaffold_3314 5 5411 bp 55.22 20.05 72.02
qs_1_scaffold_1210 10 10307 bp 55.06 20.68 72.01
qs_1_scaffold_3557 12 10829 bp 54.96 20.82 72.00
qs_1_scaffold_106 39 42629 bp 55.34 21.64 71.97
qs_1_scaffold_935 15 13789 bp 57.50 20.20 71.91
qs_1_scaffold_4626
Domain: Viridiplantae (66.67%)
9 4327 bp 52.60 20.98 71.90
qs_1_scaffold_1843 29 28694 bp 54.34 21.32 71.89
qs_1_scaffold_1337 23 15352 bp 56.19 20.87 71.87
qs_1_scaffold_2694 13 15263 bp 53.33 21.94 71.82
qs_1_scaffold_1288 11 10507 bp 54.48 21.24 71.81
qs_1_scaffold_553 24 29600 bp 56.20 20.43 71.75
qs_1_scaffold_1401 12 9442 bp 54.96 21.45 71.74
qs_1_scaffold_4500 4 4401 bp 53.94 21.56 71.71
qs_1_scaffold_97
Domain: Viridiplantae (58.82%)
34 40329 bp 56.56 20.43 71.70
qs_1_scaffold_225 31 35322 bp 55.73 21.39 71.64
qs_1_scaffold_100 41 39015 bp 55.07 20.85 71.63
qs_1_scaffold_546
Domain: Viridiplantae (54.55%)
11 16249 bp 55.06 21.19 71.62
qs_1_scaffold_1274 9 10010 bp 56.76 19.97 71.57
qs_1_scaffold_1415 23 16284 bp 51.96 22.84 71.55
qs_1_scaffold_1060 14 11665 bp 56.46 20.28 71.52
qs_1_scaffold_942
Phylum: Chlorophyta (55.56%)
9 12011 bp 57.19 20.65 71.36
qs_1_scaffold_2815 10 8993 bp 54.99 19.65 71.32
qs_1_scaffold_1628 12 10779 bp 61.93 17.65 71.28
qs_1_scaffold_765 18 13503 bp 56.67 20.56 71.27
qs_1_scaffold_4286 7 4548 bp 55.21 18.76 71.24
qs_1_scaffold_4524 3 4384 bp 55.00 20.19 71.10
qs_1_scaffold_3577 6 5155 bp 54.68 22.58 71.06
qs_1_scaffold_4883 12 7241 bp 54.92 18.82 71.05
qs_1_scaffold_2228 7 8024 bp 61.74 20.40 71.04
qs_1_scaffold_3725
Phylum: Streptophyta (66.67%)
3 5013 bp 59.07 18.13 71.04
qs_1_scaffold_4256 4 5289 bp 55.10 19.51 71.02
qs_1_scaffold_5737 5 4263 bp 55.41 22.30 71.01
qs_1_scaffold_899 14 20675 bp 56.24 21.73 70.98
Displaying items 551-600 of 896 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.