ggKbase home page
Advanced Search
Search Help

QS_1_Bacteroidetes_Order_II__Incertae_sedis_67_22

In projects: QS_1

Consensus taxonomy: Bacteroidetes Order II. Incertae sedis  →  Bacteroidetes  →  Bacteria

Taxonomy override: Bacteroidetes

Metagenomic Context

Parent: QS_1_UNK

Properties

Avg. coverage: 22.34 Longest contig: 88.39 Kbp Bin length: 2.24 Mbp GC content: 67.36 %
Contigs count: 104 Features count: 1968 rRNAs count: 0 tRNAs count: 23

Genome completeness

near complete RP 48 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 10 / 38 MC: 1
Displaying items 1-50 of 104 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qs_1_scaffold_6768
Order: Bacteroidetes Order II. Incertae sedis (50%)
4 3370 bp 65.01 23.74 94.27
qs_1_scaffold_6766
Species: Salinibacter ruber (66.67%)
3 3371 bp 67.34 25.24 82.41
qs_1_scaffold_6275
Species: Salinibacter ruber (50%)
4 3556 bp 64.31 20.89 86.14
qs_1_scaffold_15250
Species: Salinibacter ruber (66.67%)
3 3638 bp 68.94 24.68 88.07
qs_1_scaffold_5961
Species: Rhodothermus marinus (75%)
4 3677 bp 65.16 22.38 70.57
qs_1_scaffold_5006
Species: Salinibacter ruber (50%)
4 4118 bp 67.68 24.02 71.69
qs_1_scaffold_4181
Species: Salinibacter ruber (50%)
6 4627 bp 69.16 19.45 87.14
qs_1_scaffold_4258
Species: Rhodothermus marinus (50%)
4 5348 bp 66.29 24.42 72.31
qs_1_scaffold_7100
Species: Salinibacter ruber (50%)
4 6212 bp 64.65 25.19 76.50
qs_1_scaffold_7158
Species: Salinibacter ruber (60%)
5 6251 bp 65.91 21.50 74.63
qs_1_scaffold_2566
Species: Salinibacter ruber (83.33%)
6 6305 bp 67.69 19.02 84.98
qs_1_scaffold_3293
Species: Rhodothermus marinus (62.5%)
8 6614 bp 67.39 23.25 83.96
qs_1_scaffold_2190
Species: Salinibacter ruber (62.5%)
8 7030 bp 63.98 21.18 81.52
qs_1_scaffold_7941
Species: Salinibacter ruber (55.56%)
9 7659 bp 70.31 22.34 87.27
qs_1_scaffold_1783
Order: Bacteroidetes Order II. Incertae sedis (71.43%)
7 7990 bp 68.19 24.53 83.84
qs_1_scaffold_2121
Species: Salinibacter ruber (50%)
8 8050 bp 67.59 22.43 86.65
qs_1_scaffold_2019
Order: Bacteroidetes Order II. Incertae sedis (55.56%)
9 8057 bp 68.51 21.03 88.28
qs_1_scaffold_2390
Species: Salinibacter ruber (71.43%)
7 8500 bp 66.89 22.62 78.95
qs_1_scaffold_1551
Species: Salinibacter ruber (55.56%)
9 8822 bp 66.72 21.11 88.28
qs_1_scaffold_2425
Order: Bacteroidetes Order II. Incertae sedis (66.67%)
9 8870 bp 67.31 25.79 80.73
qs_1_scaffold_1523
Species: Rhodothermus marinus (71.43%)
7 8912 bp 66.21 20.18 89.47
qs_1_scaffold_2086
Order: Bacteroidetes Order II. Incertae sedis (50%)
10 9046 bp 65.42 23.08 66.25
qs_1_scaffold_1473
Species: Salinibacter ruber (66.67%)
6 9134 bp 69.72 21.06 91.04
qs_1_scaffold_3723
Species: Salinibacter ruber (57.14%)
7 9296 bp 67.44 27.31 87.97
qs_1_scaffold_3702
Order: Bacteroidetes Order II. Incertae sedis (55.56%)
9 9430 bp 68.78 22.50 82.87
qs_1_scaffold_1976
Species: Salinibacter ruber (62.5%)
8 9457 bp 69.57 21.46 78.99
qs_1_scaffold_1568
Order: Bacteroidetes Order II. Incertae sedis (50%)
10 9647 bp 64.41 24.28 78.86
qs_1_scaffold_1335
Species: Salinibacter ruber (57.14%)
7 9735 bp 65.69 21.12 88.44
qs_1_scaffold_1970
Order: Bacteroidetes Order II. Incertae sedis (55.56%)
9 9796 bp 66.17 23.04 82.72
qs_1_scaffold_1308
Species: Salinibacter ruber (100%)
8 9850 bp 65.36 21.92 75.99
qs_1_scaffold_2351
Order: Bacteroidetes Order II. Incertae sedis (81.82%)
11 9857 bp 66.26 21.48 89.93
qs_1_scaffold_1265
Order: Bacteroidetes Order II. Incertae sedis (54.55%)
11 10069 bp 66.62 23.49 87.00
qs_1_scaffold_1258
Order: Bacteroidetes Order II. Incertae sedis (72.73%)
11 10098 bp 66.72 21.22 81.69
qs_1_scaffold_2415
Order: Bacteroidetes Order II. Incertae sedis (70%)
10 10182 bp 68.43 23.18 85.68
qs_1_scaffold_1166
Order: Bacteroidetes Order II. Incertae sedis (50%)
10 10512 bp 68.39 21.39 87.56
qs_1_scaffold_3361
Species: Salinibacter ruber (50%)
10 10682 bp 69.19 25.96 83.92
qs_1_scaffold_1229
Species: Salinibacter ruber (90.91%)
11 10773 bp 67.34 25.23 85.55
qs_1_scaffold_1425
Order: Bacteroidetes Order II. Incertae sedis (77.78%)
9 10820 bp 68.68 21.57 71.67
qs_1_scaffold_2396
Species: Salinibacter ruber (60%)
10 11205 bp 65.81 21.94 88.76
qs_1_scaffold_1230
Order: Bacteroidetes Order II. Incertae sedis (50%)
12 11898 bp 67.72 23.36 83.46
qs_1_scaffold_2500
Order: Bacteroidetes Order II. Incertae sedis (81.82%)
11 12243 bp 69.62 23.47 88.90
qs_1_scaffold_1183
Order: Bacteroidetes Order II. Incertae sedis (66.67%)
12 12270 bp 66.85 21.78 81.92
qs_1_scaffold_1620
Order: Bacteroidetes Order II. Incertae sedis (66.67%)
9 12652 bp 68.62 22.43 88.87
qs_1_scaffold_1200
Species: Salinibacter ruber (66.67%)
12 13066 bp 68.15 23.31 84.52
qs_1_scaffold_802
Species: Salinibacter ruber (50%)
12 13165 bp 69.20 21.60 84.27
qs_1_scaffold_884
Order: Bacteroidetes Order II. Incertae sedis (64.29%)
14 14410 bp 68.09 22.56 85.40
qs_1_scaffold_819
Order: Bacteroidetes Order II. Incertae sedis (72.73%)
11 14462 bp 67.90 21.67 88.35
qs_1_scaffold_1623
Species: Salinibacter ruber (60%)
15 14679 bp 68.00 25.29 86.71
qs_1_scaffold_610
Order: Bacteroidetes Order II. Incertae sedis (63.64%)
11 15290 bp 65.98 21.53 81.74
qs_1_scaffold_831
Order: Bacteroidetes Order II. Incertae sedis (76.92%)
13 15796 bp 67.11 22.23 82.33
Displaying items 1-50 of 104 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.