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QS_1_Bacteroidetes_Order_II__Incertae_sedis_67_22

In projects: QS_1

Consensus taxonomy: Bacteroidetes Order II. Incertae sedis  →  Bacteroidetes  →  Bacteria

Taxonomy override: Bacteroidetes

Metagenomic Context

Parent: QS_1_UNK

Properties

Avg. coverage: 22.34 Longest contig: 88.39 Kbp Bin length: 2.24 Mbp GC content: 67.36 %
Contigs count: 104 Features count: 1968 rRNAs count: 0 tRNAs count: 23

Genome completeness

near complete RP 48 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 10 / 38 MC: 1
Displaying items 1-50 of 104 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qs_1_scaffold_3723
Species: Salinibacter ruber (57.14%)
7 9296 bp 67.44 27.31 87.97
qs_1_scaffold_2590
Order: Bacteroidetes Order II. Incertae sedis (57.14%)
21 21396 bp 66.98 27.23 89.58
qs_1_scaffold_3361
Species: Salinibacter ruber (50%)
10 10682 bp 69.19 25.96 83.92
qs_1_scaffold_2425
Order: Bacteroidetes Order II. Incertae sedis (66.67%)
9 8870 bp 67.31 25.79 80.73
qs_1_scaffold_1623
Species: Salinibacter ruber (60%)
15 14679 bp 68.00 25.29 86.71
qs_1_scaffold_6766
Species: Salinibacter ruber (66.67%)
3 3371 bp 67.34 25.24 82.41
qs_1_scaffold_1229
Species: Salinibacter ruber (90.91%)
11 10773 bp 67.34 25.23 85.55
qs_1_scaffold_7100
Species: Salinibacter ruber (50%)
4 6212 bp 64.65 25.19 76.50
qs_1_scaffold_15250
Species: Salinibacter ruber (66.67%)
3 3638 bp 68.94 24.68 88.07
qs_1_scaffold_1783
Order: Bacteroidetes Order II. Incertae sedis (71.43%)
7 7990 bp 68.19 24.53 83.84
qs_1_scaffold_473
Order: Bacteroidetes Order II. Incertae sedis (50%)
16 17962 bp 67.49 24.44 86.52
qs_1_scaffold_4258
Species: Rhodothermus marinus (50%)
4 5348 bp 66.29 24.42 72.31
qs_1_scaffold_1254
Species: Salinibacter ruber (50%)
16 21878 bp 66.29 24.35 87.39
qs_1_scaffold_1568
Order: Bacteroidetes Order II. Incertae sedis (50%)
10 9647 bp 64.41 24.28 78.86
qs_1_scaffold_5006
Species: Salinibacter ruber (50%)
4 4118 bp 67.68 24.02 71.69
qs_1_scaffold_540
Order: Bacteroidetes Order II. Incertae sedis (55%)
20 22568 bp 67.35 23.95 87.19
qs_1_scaffold_503
Order: Bacteroidetes Order II. Incertae sedis (71.05%)
38 46799 bp 68.62 23.92 88.30
qs_1_scaffold_458
Order: Bacteroidetes Order II. Incertae sedis (72%)
25 31946 bp 68.61 23.79 87.76
qs_1_scaffold_6768
Order: Bacteroidetes Order II. Incertae sedis (50%)
4 3370 bp 65.01 23.74 94.27
qs_1_scaffold_179
Species: Salinibacter ruber (50%)
60 61934 bp 67.81 23.49 83.70
qs_1_scaffold_1265
Order: Bacteroidetes Order II. Incertae sedis (54.55%)
11 10069 bp 66.62 23.49 87.00
qs_1_scaffold_2500
Order: Bacteroidetes Order II. Incertae sedis (81.82%)
11 12243 bp 69.62 23.47 88.90
qs_1_scaffold_1230
Order: Bacteroidetes Order II. Incertae sedis (50%)
12 11898 bp 67.72 23.36 83.46
qs_1_scaffold_1200
Species: Salinibacter ruber (66.67%)
12 13066 bp 68.15 23.31 84.52
qs_1_scaffold_3293
Species: Rhodothermus marinus (62.5%)
8 6614 bp 67.39 23.25 83.96
qs_1_scaffold_2415
Order: Bacteroidetes Order II. Incertae sedis (70%)
10 10182 bp 68.43 23.18 85.68
qs_1_scaffold_2123
Order: Bacteroidetes Order II. Incertae sedis (60%)
15 16414 bp 67.58 23.13 78.48
qs_1_scaffold_2086
Order: Bacteroidetes Order II. Incertae sedis (50%)
10 9046 bp 65.42 23.08 66.25
qs_1_scaffold_460
Order: Bacteroidetes Order II. Incertae sedis (60%)
35 40762 bp 65.53 23.06 82.05
qs_1_scaffold_1970
Order: Bacteroidetes Order II. Incertae sedis (55.56%)
9 9796 bp 66.17 23.04 82.72
qs_1_scaffold_573
Order: Bacteroidetes Order II. Incertae sedis (54.24%)
59 70510 bp 68.01 23.01 87.12
qs_1_scaffold_534
Order: Bacteroidetes Order II. Incertae sedis (64.29%)
14 17362 bp 68.68 22.90 85.13
qs_1_scaffold_1016
Order: Bacteroidetes Order II. Incertae sedis (71.43%)
21 19327 bp 66.93 22.90 84.24
qs_1_scaffold_1912
Order: Bacteroidetes Order II. Incertae sedis (77.27%)
22 22642 bp 68.66 22.85 84.75
qs_1_scaffold_565
Order: Bacteroidetes Order II. Incertae sedis (59.26%)
27 29647 bp 66.25 22.83 80.98
qs_1_scaffold_119
Order: Bacteroidetes Order II. Incertae sedis (54.55%)
55 64810 bp 67.93 22.81 86.74
qs_1_scaffold_2719
Species: Salinibacter ruber (57.14%)
14 18869 bp 67.56 22.70 77.19
qs_1_scaffold_949
Order: Bacteroidetes Order II. Incertae sedis (50%)
8 18927 bp 68.65 22.69 84.07
qs_1_scaffold_2390
Species: Salinibacter ruber (71.43%)
7 8500 bp 66.89 22.62 78.95
qs_1_scaffold_634
Genus: Salinibacter (50%)
22 20651 bp 66.78 22.58 84.30
qs_1_scaffold_884
Order: Bacteroidetes Order II. Incertae sedis (64.29%)
14 14410 bp 68.09 22.56 85.40
qs_1_scaffold_883
Order: Bacteroidetes Order II. Incertae sedis (61.54%)
13 18072 bp 66.68 22.54 86.10
qs_1_scaffold_2845
Order: Bacteroidetes Order II. Incertae sedis (55.56%)
18 17883 bp 68.11 22.52 81.46
qs_1_scaffold_3702
Order: Bacteroidetes Order II. Incertae sedis (55.56%)
9 9430 bp 68.78 22.50 82.87
qs_1_scaffold_2121
Species: Salinibacter ruber (50%)
8 8050 bp 67.59 22.43 86.65
qs_1_scaffold_1620
Order: Bacteroidetes Order II. Incertae sedis (66.67%)
9 12652 bp 68.62 22.43 88.87
qs_1_scaffold_753
Order: Bacteroidetes Order II. Incertae sedis (70%)
20 22385 bp 67.56 22.39 77.74
qs_1_scaffold_481
Order: Bacteroidetes Order II. Incertae sedis (60%)
15 17336 bp 68.90 22.39 88.59
qs_1_scaffold_5961
Species: Rhodothermus marinus (75%)
4 3677 bp 65.16 22.38 70.57
qs_1_scaffold_129
Order: Bacteroidetes Order II. Incertae sedis (63.16%)
38 45585 bp 67.43 22.38 86.17
Displaying items 1-50 of 104 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.