ggKbase home page
Advanced Search
Search Help

QS_1_Bacteroidetes_Order_II__Incertae_sedis_67_22

In projects: QS_1

Consensus taxonomy: Bacteroidetes Order II. Incertae sedis  →  Bacteroidetes  →  Bacteria

Taxonomy override: Bacteroidetes

Metagenomic Context

Parent: QS_1_UNK

Properties

Avg. coverage: 22.34 Longest contig: 88.39 Kbp Bin length: 2.24 Mbp GC content: 67.36 %
Contigs count: 104 Features count: 1968 rRNAs count: 0 tRNAs count: 23

Genome completeness

near complete RP 48 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 10 / 38 MC: 1
Displaying items 1-50 of 104 in total
contig # features sequence size GC content (%) Cov Coding Density (%) notes
qs_1_scaffold_152
Order: Bacteroidetes Order II. Incertae sedis (52.44%)
82 88388 bp 66.79 22.35 78.72
qs_1_scaffold_180
Order: Bacteroidetes Order II. Incertae sedis (65.28%)
72 78639 bp 67.50 21.04 86.75
qs_1_scaffold_179
Species: Salinibacter ruber (50%)
60 61934 bp 67.81 23.49 83.70
qs_1_scaffold_573
Order: Bacteroidetes Order II. Incertae sedis (54.24%)
59 70510 bp 68.01 23.01 87.12
qs_1_scaffold_119
Order: Bacteroidetes Order II. Incertae sedis (54.55%)
55 64810 bp 67.93 22.81 86.74
qs_1_scaffold_193
Order: Bacteroidetes Order II. Incertae sedis (60%)
55 64326 bp 66.89 21.05 88.26
qs_1_scaffold_374
Order: Bacteroidetes Order II. Incertae sedis (61.7%)
47 51519 bp 68.08 22.05 84.18
qs_1_scaffold_297
Species: Salinibacter ruber (50%)
46 54991 bp 67.55 22.05 86.27
qs_1_scaffold_503
Order: Bacteroidetes Order II. Incertae sedis (71.05%)
38 46799 bp 68.62 23.92 88.30
qs_1_scaffold_129
Order: Bacteroidetes Order II. Incertae sedis (63.16%)
38 45585 bp 67.43 22.38 86.17
qs_1_scaffold_198
Order: Bacteroidetes Order II. Incertae sedis (70.27%)
37 49422 bp 66.45 21.51 86.06
qs_1_scaffold_194
Order: Bacteroidetes Order II. Incertae sedis (72.97%)
37 47946 bp 67.47 20.44 84.36
qs_1_scaffold_460
Order: Bacteroidetes Order II. Incertae sedis (60%)
35 40762 bp 65.53 23.06 82.05
qs_1_scaffold_254
Species: Salinibacter ruber (54.29%)
35 35585 bp 67.24 21.89 86.76
qs_1_scaffold_467
Order: Bacteroidetes Order II. Incertae sedis (52.94%)
34 36004 bp 67.26 22.30 76.31
qs_1_scaffold_301
Order: Bacteroidetes Order II. Incertae sedis (67.65%)
34 39092 bp 67.19 22.08 83.68
qs_1_scaffold_205
Order: Bacteroidetes Order II. Incertae sedis (64.71%)
34 34393 bp 67.57 21.81 84.84
qs_1_scaffold_104
Order: Bacteroidetes Order II. Incertae sedis (67.65%)
34 36656 bp 66.78 21.63 84.41
qs_1_scaffold_516
Order: Bacteroidetes Order II. Incertae sedis (53.33%)
30 38672 bp 66.47 20.72 85.12
qs_1_scaffold_429
Species: Salinibacter ruber (55.17%)
29 18548 bp 63.65 21.32 81.92
qs_1_scaffold_717
Order: Bacteroidetes Order II. Incertae sedis (67.86%)
28 34063 bp 67.07 22.13 85.77
qs_1_scaffold_371
Species: Salinibacter ruber (66.67%)
27 33915 bp 64.54 21.24 84.75
qs_1_scaffold_565
Order: Bacteroidetes Order II. Incertae sedis (59.26%)
27 29647 bp 66.25 22.83 80.98
qs_1_scaffold_458
Order: Bacteroidetes Order II. Incertae sedis (72%)
25 31946 bp 68.61 23.79 87.76
qs_1_scaffold_706
Order: Bacteroidetes Order II. Incertae sedis (69.57%)
23 21041 bp 66.83 21.63 83.85
qs_1_scaffold_574
Order: Bacteroidetes Order II. Incertae sedis (52.17%)
23 24279 bp 67.33 21.72 82.02
qs_1_scaffold_1912
Order: Bacteroidetes Order II. Incertae sedis (77.27%)
22 22642 bp 68.66 22.85 84.75
qs_1_scaffold_1129
Species: Salinibacter ruber (54.55%)
22 21081 bp 67.11 22.10 82.00
qs_1_scaffold_794
Order: Bacteroidetes Order II. Incertae sedis (54.55%)
22 32288 bp 69.08 22.14 87.89
qs_1_scaffold_634
Genus: Salinibacter (50%)
22 20651 bp 66.78 22.58 84.30
qs_1_scaffold_1016
Order: Bacteroidetes Order II. Incertae sedis (71.43%)
21 19327 bp 66.93 22.90 84.24
qs_1_scaffold_433
Order: Bacteroidetes Order II. Incertae sedis (71.43%)
21 25895 bp 66.61 20.50 88.69
qs_1_scaffold_2590
Order: Bacteroidetes Order II. Incertae sedis (57.14%)
21 21396 bp 66.98 27.23 89.58
qs_1_scaffold_753
Order: Bacteroidetes Order II. Incertae sedis (70%)
20 22385 bp 67.56 22.39 77.74
qs_1_scaffold_540
Order: Bacteroidetes Order II. Incertae sedis (55%)
20 22568 bp 67.35 23.95 87.19
qs_1_scaffold_316
Species: Rhodothermus marinus (55%)
20 29453 bp 68.38 22.10 90.03
qs_1_scaffold_702
Species: Salinibacter ruber (60%)
20 22594 bp 68.41 21.87 85.97
qs_1_scaffold_166
Species: Salinibacter ruber (63.16%)
19 28586 bp 68.02 21.76 89.72
qs_1_scaffold_1233
Species: Salinibacter ruber (66.67%)
18 21725 bp 66.70 21.86 83.63
qs_1_scaffold_408
Order: Bacteroidetes Order II. Incertae sedis (50%)
18 19842 bp 67.60 22.08 83.07
qs_1_scaffold_2151
Order: Bacteroidetes Order II. Incertae sedis (50%)
18 16438 bp 66.94 21.86 86.31
qs_1_scaffold_2845
Order: Bacteroidetes Order II. Incertae sedis (55.56%)
18 17883 bp 68.11 22.52 81.46
qs_1_scaffold_519
Order: Bacteroidetes Order II. Incertae sedis (75%)
16 25789 bp 69.01 21.36 87.33
qs_1_scaffold_488
Species: Salinibacter ruber (62.5%)
16 21608 bp 65.71 21.86 85.47
qs_1_scaffold_473
Order: Bacteroidetes Order II. Incertae sedis (50%)
16 17962 bp 67.49 24.44 86.52
qs_1_scaffold_792
Order: Bacteroidetes Order II. Incertae sedis (50%)
16 20615 bp 68.82 21.33 86.40
qs_1_scaffold_1254
Species: Salinibacter ruber (50%)
16 21878 bp 66.29 24.35 87.39
qs_1_scaffold_465
Order: Bacteroidetes Order II. Incertae sedis (75%)
16 18444 bp 67.19 21.23 85.59
qs_1_scaffold_2123
Order: Bacteroidetes Order II. Incertae sedis (60%)
15 16414 bp 67.58 23.13 78.48
qs_1_scaffold_1623
Species: Salinibacter ruber (60%)
15 14679 bp 68.00 25.29 86.71
Displaying items 1-50 of 104 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.