ggKbase home page

qs_1_scaffold_438_4

Organism: QS_1_Bacteroidetes_Order_II__Incertae_sedis_67_20

near complete RP 52 / 55 MC: 2 BSCG 49 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: comp(2930..3139)

Top 3 Functional Annotations

Value Algorithm Source
Choline dehydrogenase {ECO:0000313|EMBL:CCW18090.1}; EC=1.1.99.1 {ECO:0000313|EMBL:CCW18090.1};; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadace similarity UNIPROT
DB: UniProtKB
  • Identity: 56.4
  • Coverage: 55.0
  • Bit_score: 64
  • Evalue 6.90e-08
Choline dehydrogenase n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MLK1_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 56.4
  • Coverage: 55.0
  • Bit_score: 64
  • Evalue 5.00e-08
glucose-methanol-choline oxidoreductase similarity KEGG
DB: KEGG
  • Identity: 48.5
  • Coverage: 68.0
  • Bit_score: 62
  • Evalue 5.30e-08

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingobium japonicum → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 210
ATGGGCACCGGCGAGCACGCCGTGGTAGACCAGAGCCTGCGCGTACACGGCCTCGACGGGCTGCGCGTGGTCGACACCTCGGTAATGCCCGCCGCTGTGTGCGGGACGACTGCCCTGTCACTGGCACTGCTCGCCGAGCACGCCGCCGCGCTGCTTTTCGCGGCATCGGTTCCCTCAGGAGCCACTCTTCAGCGCACCCCCGCGGTGTAG
PROTEIN sequence
Length: 70
MGTGEHAVVDQSLRVHGLDGLRVVDTSVMPAAVCGTTALSLALLAEHAAALLFAASVPSGATLQRTPAV*