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QS_3_Halobacteriales_65_65

In projects: QS_3  |  diaphorachaeota  |  archaea_ggkbase

Consensus taxonomy: Halobacteriales  →  Halobacteria  →  Euryarchaeota  →  Archaea

Taxonomy override: Euryarchaeota

Displaying items 1-50 of 266 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qs_3_scaffold_1557
Species: Halorhabdus tiamatea (66.67%)
3 5142 bp 65.87 67.93 100.06
qs_3_scaffold_2633
Species: Halococcus thailandensis (50%)
2 3238 bp 62.38 57.04 99.41
qs_3_scaffold_1218
Species: Halococcus saccharolyticus (80%)
5 6304 bp 62.75 69.54 99.08
qs_3_scaffold_1377
Order: Halobacteriales (77.78%)
18 9559 bp 65.30 72.76 98.70
qs_3_scaffold_2628
Genus: Halococcus (66.67%)
3 3245 bp 66.84 67.83 98.27
qs_3_scaffold_1517
Class: Halobacteria (57.14%)
7 5250 bp 66.53 61.62 98.06
qs_3_scaffold_2662
Order: Halobacteriales (100%)
3 3219 bp 66.14 63.78 95.62
qs_3_scaffold_1399
Genus: Halococcus (50%)
4 5610 bp 67.83 67.83 95.62
qs_3_scaffold_4977
Order: Halobacteriales (60%)
5 6145 bp 64.70 62.34 95.35
qs_3_scaffold_1494
Genus: Halococcus (83.33%)
6 5955 bp 65.14 67.49 95.31
qs_3_scaffold_1053
Class: Halobacteria (100%)
9 6989 bp 65.56 68.18 94.13
qs_3_scaffold_1942
Class: Halobacteria (60%)
5 4249 bp 66.65 68.53 93.41
qs_3_scaffold_2909
Species: Halococcus salifodinae (60%)
5 5009 bp 64.42 66.88 93.31
qs_3_scaffold_1018
Class: Halobacteria (66.67%)
9 11456 bp 66.71 68.20 93.20
qs_3_scaffold_691
Order: Natrialbales (70%)
10 9618 bp 64.88 66.30 93.08
qs_3_scaffold_1434
Order: Natrialbales (50%)
4 6513 bp 65.68 61.96 92.95
qs_3_scaffold_2484
Genus: Halococcus (50%)
4 5740 bp 63.80 62.51 92.77
qs_3_scaffold_2667
Genus: Halococcus (71.43%)
7 3212 bp 63.23 63.61 92.65
qs_3_scaffold_2979
Order: Halobacteriales (66.67%)
3 3377 bp 63.40 59.99 92.48
qs_3_scaffold_1608
Class: Halobacteria (77.78%)
9 5005 bp 64.46 61.62 92.37
qs_3_scaffold_2256
Species: Halogranum salarium (50%)
4 3750 bp 67.36 69.84 91.76
qs_3_scaffold_1634
Genus: Halococcus (60%)
5 6432 bp 64.66 64.33 91.74
qs_3_scaffold_1967
Class: Halobacteria (66.67%)
6 7411 bp 61.73 66.16 91.53
qs_3_scaffold_496
Class: Halobacteria (76.92%)
13 13499 bp 63.91 67.20 91.36
qs_3_scaffold_669
Order: Halobacteriales (50%)
10 11183 bp 64.91 65.92 91.18
qs_3_scaffold_2621
Genus: Haloferax (50%)
4 3261 bp 62.53 68.35 91.17
qs_3_scaffold_566
Order: Halobacteriales (50%)
10 11002 bp 64.34 70.36 91.07
qs_3_scaffold_2837
Genus: Halococcus (66.67%)
3 3489 bp 65.75 59.78 91.06
qs_3_scaffold_1314
Class: Halobacteria (88.89%)
9 8076 bp 65.74 60.30 91.01
qs_3_scaffold_1965
Order: Halobacteriales (66.67%)
12 9965 bp 65.94 64.98 90.92
qs_3_scaffold_1752
Class: Halobacteria (80%)
5 4637 bp 62.99 57.28 90.71
qs_3_scaffold_2791
Order: Halobacteriales (50%)
4 3785 bp 66.00 62.88 90.52
qs_3_scaffold_3942
Order: Halobacteriales (66.67%)
3 3188 bp 66.53 70.11 90.34
qs_3_scaffold_2078
Class: Halobacteria (57.14%)
7 5971 bp 64.95 62.42 90.34
qs_3_scaffold_2024
Genus: Halococcus (53.85%)
13 11710 bp 65.36 67.63 90.26
qs_3_scaffold_614
Order: Halobacteriales (53.85%)
13 10287 bp 66.43 69.44 90.17
qs_3_scaffold_2554
Class: Halobacteria (66.67%)
3 3343 bp 67.45 65.99 90.01
qs_3_scaffold_2381
Genus: Halococcus (50%)
4 3593 bp 62.82 67.19 90.01
qs_3_scaffold_1490
Genus: Halococcus (52.63%)
19 18194 bp 65.51 66.66 89.90
qs_3_scaffold_1703
Order: Halobacteriales (72.73%)
11 13308 bp 62.89 65.50 89.81
qs_3_scaffold_2580
Class: Halobacteria (100%)
6 4605 bp 65.97 61.06 89.58
qs_3_scaffold_2358
Class: Halobacteria (100%)
3 3626 bp 64.07 62.69 89.52
qs_3_scaffold_2715
Class: Halobacteria (75%)
4 3164 bp 67.10 68.08 89.51
qs_3_scaffold_868
Class: Halobacteria (54.55%)
11 11013 bp 65.75 67.42 89.49
qs_3_scaffold_1097
Genus: Halococcus (50%)
14 14801 bp 64.55 66.21 89.47
qs_3_scaffold_2227
Class: Halobacteria (100%)
3 3807 bp 64.51 67.50 89.44
qs_3_scaffold_2158
Order: Halobacteriales (60%)
5 4724 bp 65.28 65.39 89.29
qs_3_scaffold_753
Genus: Halococcus (70%)
10 14748 bp 65.93 67.41 89.24
qs_3_scaffold_1931
Genus: Halococcus (60%)
5 4732 bp 60.82 65.38 89.20
qs_3_scaffold_1137
Order: Halobacteriales (83.33%)
18 17771 bp 64.18 64.21 89.15
Displaying items 1-50 of 266 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.