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qs_4_scaffold_1024

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_4_scaffold_1024_1
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2..292)
DNA (291bp) protein (97aa)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase {ECO:0000256|HAMAP-Rule:MF_00208}; EC=6.3.2.13 {ECO:0000256|HAMAP-Rule:MF_00208};; Meso-A2pm-adding enzyme {ECO:0000256|HAMAP-Rule
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase n=1 Tax=Oscillibacter sp. 1-3 RepID=R9MAJ5_9FIRM
murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
qs_4_scaffold_1024_2
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(435..2480)
DNA (2046bp) protein (682aa)
peptidoglycan glycosyltransferase (EC:2.4.1.129)
Peptidoglycan glycosyltransferase {ECO:0000313|EMBL:AEN74607.1}; EC=2.4.1.129 {ECO:0000313|EMBL:AEN74607.1};; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rho
Peptidoglycan glycosyltransferase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SL90_RHOMR
qs_4_scaffold_1024_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(2497..2883)
DNA (387bp) protein (129aa)
hypothetical protein
hypothetical protein id=24657404 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:ABC43676.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_4_scaffold_1024_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(2950..3690)
DNA (741bp) protein (247aa)
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_0100
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H6A5_SALRM
mraW; S-adenosyl-methyltransferase mraW
qs_4_scaffold_1024_5
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(4085..4531)
DNA (447bp) protein (149aa)
Protein MraZ n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H6A4_SALRM
mraZ; protein MraZ
Transcriptional regulator MraZ {ECO:0000256|HAMAP-Rule:MF_01008, ECO:0000256|SAAS:SAAS00217766}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae;
qs_4_scaffold_1024_6
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

4917..5564
DNA (648bp) protein (216aa)
Transcriptional repressor, LexA family n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MGL8_RHOM4
LexA family transcriptional repressor
Transcriptional repressor, LexA family {ECO:0000313|EMBL:ACY49581.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rh
qs_4_scaffold_1024_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

5914..7140
DNA (1227bp) protein (409aa)
Arsenite-activated ATPase (ArsA) subfamily {ECO:0000313|EMBL:ABC46144.1}; EC=3.6.1.- {ECO:0000313|EMBL:ABC46144.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sed
Arsenite-activated ATPase (ArsA) subfamily n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2RZW1_SALRD
arsenite-activated ATPase ArsA
qs_4_scaffold_1024_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

7237..8778
DNA (1542bp) protein (514aa)
3-hydroxy-3-methylglutaryl coenzyme A reductase {ECO:0000313|EMBL:CBH25561.1}; EC=1.1.1.34 {ECO:0000313|EMBL:CBH25561.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incert
hydroxymethylglutaryl-CoA reductase n=1 Tax=Salisaeta longa RepID=UPI0003B6943F
hmgA; 3-hydroxy-3-methylglutaryl coenzyme A reductase
qs_4_scaffold_1024_9
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

9133..10071
DNA (939bp) protein (313aa)
hypothetical protein n=1 Tax=Oscillatoria sp. PCC 10802 RepID=UPI000371DB9B
gluconolactonase
Gluconolactonase {ECO:0000313|EMBL:AFZ16004.1}; Flags: Precursor;; TaxID=1173027 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus sp. PCC 71
qs_4_scaffold_1024_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(10144..10761)
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H8U8_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24453.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_4_scaffold_1024_11
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(11391..12566)
DNA (1176bp) protein (392aa)
Mammalian cell entry related domain protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MG49_RHOM4
mammalian cell entry domain-containing protein
Mammalian cell entry related domain protein {ECO:0000313|EMBL:AEN74076.1}; Flags: Precursor;; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rh
qs_4_scaffold_1024_12
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(12670..13596)
DNA (927bp) protein (309aa)
ABC transporter related protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MG48_RHOM4
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ACY47604.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodother
qs_4_scaffold_1024_13
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(13685..14488)
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SGT1_RHOMR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY47603.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus mari
qs_4_scaffold_1024_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(14582..19996)
DNA (5415bp) protein (1805aa)
hypothetical protein; K09800 hypothetical protein id=24659206 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24371.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_4_scaffold_1024_15
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(20217..22454)
DNA (2238bp) protein (746aa)
Surface antigen (D15) n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SGT3_RHOMR
surface antigen (D15)
Surface antigen (D15) {ECO:0000313|EMBL:AEN74080.1}; Flags: Precursor;; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="
qs_4_scaffold_1024_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(22696..23874)
DNA (1179bp) protein (393aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B55CA1
yihY; YihY family protein
YihY family protein {ECO:0000313|EMBL:ABC44576.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (s
qs_4_scaffold_1024_17
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(24017..25309)
DNA (1293bp) protein (431aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SGT5_RHOMR
ATP-dependent Clp protease ATP-binding subunit ClpX
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae se
qs_4_scaffold_1024_18
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

25605..26423
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MCV0_RHOM4
hypothetical protein
Laccase domain protein {ECO:0000256|RuleBase:RU361274}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus mar
qs_4_scaffold_1024_19
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

26604..27146
DNA (543bp) protein (181aa)
Putative asparaginase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MFM7_RHOM4
asparaginase
Putative asparaginase {ECO:0000313|EMBL:ACY47554.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinu
qs_4_scaffold_1024_20
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(27413..27700)
DNA (288bp) protein (96aa)
hypothetical protein
hypothetical protein id=24658080 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH25283.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_4_scaffold_1024_21
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(27854..28303)
DNA (450bp) protein (150aa)
rplI; 50S ribosomal protein L9
rplI; 50S ribosomal protein L9; K02939 large subunit ribosomal protein L9 id=24659316 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503, ECO:0000313|EMBL:CBH24483.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinib
qs_4_scaffold_1024_22
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(28395..28610)
DNA (216bp) protein (72aa)
rpsR; 30S ribosomal protein S18
rpsR; 30S ribosomal protein S18; K02963 small subunit ribosomal protein S18 id=24659315 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270, ECO:0000313|EMBL:CBH24482.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salini
qs_4_scaffold_1024_23
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(28658..29077)
DNA (420bp) protein (140aa)
30S ribosomal protein S6 n=2 Tax=Salinibacter ruber RepID=Q2S2U2_SALRD
rpsF; 30S ribosomal protein S6
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360, ECO:0000313|EMBL:CBH24481.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinib
qs_4_scaffold_1024_24
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(29289..30362)
DNA (1074bp) protein (358aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B72844
prfA; peptide chain release factor 1
Peptide chain release factor 1 {ECO:0000255|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000255|HAMAP-Rule:MF_00093};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis;
Displaying 24 items

View Taxonomy