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QS_4_Bacteroidetes_Order_II__Incertae_sedis_67_15

In projects: QS_4

Consensus taxonomy: Bacteroidetes Order II. Incertae sedis  →  Bacteroidetes  →  Bacteria

Taxonomy override: Bacteroidetes

Metagenomic Context

Parent: QS_4_UNK

Properties

Avg. coverage: 15.01 Longest contig: 135.36 Kbp Bin length: 2.55 Mbp GC content: 67.24 %
Contigs count: 96 Features count: 2238 rRNAs count: 1 tRNAs count: 36

Genome completeness

near complete RP 51 / 55 MC: 2 BSCG 50 / 51 MC: 1 ASCG 13 / 38
Displaying items 1-50 of 96 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qs_4_scaffold_141
Phylum: Bacteroidetes (57.43%)
101 135362 bp 66.92 16.44 86.66
qs_4_scaffold_385
Order: Bacteroidetes Order II. Incertae sedis (64.29%)
70 75076 bp 67.45 14.47 86.14
qs_4_scaffold_547
Species: Salinibacter ruber (55.88%)
68 73460 bp 67.50 14.93 84.61
qs_4_scaffold_506
Order: Bacteroidetes Order II. Incertae sedis (70.49%)
61 67529 bp 67.75 15.32 83.83
qs_4_scaffold_913
Order: Bacteroidetes Order II. Incertae sedis (60.66%)
61 65536 bp 67.26 15.72 82.29
qs_4_scaffold_394
Order: Bacteroidetes Order II. Incertae sedis (67.8%)
59 68243 bp 66.93 14.18 87.49
qs_4_scaffold_779
Order: Bacteroidetes Order II. Incertae sedis (64.41%)
59 58250 bp 67.50 15.41 82.52
qs_4_scaffold_186
Order: Bacteroidetes Order II. Incertae sedis (52.63%)
57 63933 bp 66.12 17.22 73.01
qs_4_scaffold_812
Order: Bacteroidetes Order II. Incertae sedis (68.42%)
57 63622 bp 67.87 14.55 88.02
qs_4_scaffold_252
Order: Bacteroidetes Order II. Incertae sedis (55.36%)
56 67215 bp 66.73 15.12 88.29
qs_4_scaffold_1187
Order: Bacteroidetes Order II. Incertae sedis (60.78%)
51 68046 bp 67.66 15.96 85.81
qs_4_scaffold_351
Order: Bacteroidetes Order II. Incertae sedis (66.67%)
51 57809 bp 68.69 15.38 86.17
qs_4_scaffold_738
Order: Bacteroidetes Order II. Incertae sedis (62%)
50 50953 bp 67.84 14.08 88.69
qs_4_scaffold_504
Order: Bacteroidetes Order II. Incertae sedis (58%)
50 52520 bp 67.35 15.63 85.01
qs_4_scaffold_222
Species: Salinibacter ruber (52.08%)
48 51956 bp 65.22 13.17 86.78
qs_4_scaffold_338
Order: Bacteroidetes Order II. Incertae sedis (62.22%)
45 53679 bp 67.71 14.46 83.58
qs_4_scaffold_139
Order: Bacteroidetes Order II. Incertae sedis (72.73%)
44 49019 bp 67.31 14.26 85.71
qs_4_scaffold_612
Order: Bacteroidetes Order II. Incertae sedis (65.85%)
41 48740 bp 67.37 14.15 85.62
qs_4_scaffold_225
Species: Salinibacter ruber (52.78%)
36 43276 bp 67.74 15.27 86.40
qs_4_scaffold_1017
Order: Bacteroidetes Order II. Incertae sedis (52.78%)
36 43893 bp 67.89 16.53 81.85
qs_4_scaffold_1115
Order: Bacteroidetes Order II. Incertae sedis (65.71%)
35 45683 bp 67.46 14.45 86.14
qs_4_scaffold_516
Phylum: Bacteroidetes (52.94%)
34 34965 bp 68.21 15.94 82.20
qs_4_scaffold_499
Order: Bacteroidetes Order II. Incertae sedis (55.88%)
34 45926 bp 66.85 16.11 83.22
qs_4_scaffold_299
Order: Bacteroidetes Order II. Incertae sedis (66.67%)
33 39746 bp 68.32 14.65 86.60
qs_4_scaffold_737
Order: Bacteroidetes Order II. Incertae sedis (68.75%)
32 35864 bp 67.90 15.47 83.34
qs_4_scaffold_487
Order: Bacteroidetes Order II. Incertae sedis (54.84%)
31 29263 bp 68.69 15.20 85.75
qs_4_scaffold_382
Order: Bacteroidetes Order II. Incertae sedis (60.71%)
28 29107 bp 65.97 14.49 88.00
qs_4_scaffold_526
Species: Salinibacter ruber (50%)
28 29590 bp 68.54 14.94 85.93
qs_4_scaffold_867
Order: Bacteroidetes Order II. Incertae sedis (62.96%)
27 37355 bp 67.77 15.39 83.74
qs_4_scaffold_765
Order: Bacteroidetes Order II. Incertae sedis (52%)
25 34446 bp 65.96 14.59 87.36
qs_4_scaffold_373
Species: Salinibacter ruber (60%)
25 29760 bp 65.14 13.66 87.49
qs_4_scaffold_861
Order: Bacteroidetes Order II. Incertae sedis (72%)
25 34164 bp 65.43 13.60 85.89
qs_4_scaffold_870
Species: Salinibacter ruber (72%)
25 15878 bp 63.85 13.87 82.85
qs_4_scaffold_946
Phylum: Bacteroidetes (50%)
24 26015 bp 67.21 13.52 85.10
qs_4_scaffold_1103
Order: Bacteroidetes Order II. Incertae sedis (66.67%)
24 26524 bp 66.04 14.48 83.18
qs_4_scaffold_1024
Species: Salinibacter ruber (54.17%)
24 30595 bp 68.50 16.32 84.09
qs_4_scaffold_829
Order: Bacteroidetes Order II. Incertae sedis (80.95%)
21 24322 bp 67.49 15.94 88.91
qs_4_scaffold_1470
Order: Bacteroidetes Order II. Incertae sedis (71.43%)
21 21070 bp 68.20 14.25 85.69
qs_4_scaffold_1517
Phylum: Bacteroidetes (52.38%)
21 18587 bp 65.43 14.27 75.90
qs_4_scaffold_894
Order: Bacteroidetes Order II. Incertae sedis (57.14%)
21 28762 bp 65.70 14.38 82.70
qs_4_scaffold_624
Species: Salinibacter ruber (50%)
20 21056 bp 67.06 16.80 81.61
qs_4_scaffold_957
Species: Salinibacter ruber (65%)
20 14889 bp 68.07 14.44 79.23
qs_4_scaffold_1234
Phylum: Bacteroidetes (73.68%)
19 22171 bp 68.82 13.52 90.35
qs_4_scaffold_1083
Order: Bacteroidetes Order II. Incertae sedis (78.95%)
19 24132 bp 67.78 14.12 83.58
qs_4_scaffold_827
Order: Bacteroidetes Order II. Incertae sedis (73.68%)
19 24569 bp 67.07 15.28 89.31
qs_4_scaffold_598
Order: Bacteroidetes Order II. Incertae sedis (55.56%)
18 21485 bp 67.34 14.27 82.59
qs_4_scaffold_1036
Order: Bacteroidetes Order II. Incertae sedis (61.11%)
18 16951 bp 66.77 14.44 83.16
qs_4_scaffold_2798
Order: Bacteroidetes Order II. Incertae sedis (55.56%)
18 13875 bp 67.14 13.90 82.34
qs_4_scaffold_1421
Order: Bacteroidetes Order II. Incertae sedis (58.82%)
17 22282 bp 67.12 13.52 89.39
qs_4_scaffold_1084
Phylum: Bacteroidetes (70.59%)
17 21370 bp 66.72 14.66 83.65
Displaying items 1-50 of 96 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.