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qs_4_scaffold_765

Search features with annotation key words

Displaying 25 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_4_scaffold_765_1
unknown

Not on your lists

comp(226..675)
DNA (450bp) protein (150aa)

This feature has no annotations

qs_4_scaffold_765_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(629..3460)
DNA (2832bp) protein (944aa)
Ribosomal protein S1, putative n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S1M7_SALRD
30S ribosomal protein S1
Ribosomal protein S1, putative {ECO:0000313|EMBL:ABC44287.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibact
qs_4_scaffold_765_3
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(3705..4406)
DNA (702bp) protein (234aa)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00238};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00238};; Cytidine monophosphate kinase {ECO:0000256|HAMAP-Rule:
Cytidylate kinase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SF40_RHOMR
Cytidylate kinase
qs_4_scaffold_765_4
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(4518..5186)
DNA (669bp) protein (223aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein
hypothetical protein id=24659750 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
qs_4_scaffold_765_5
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

5330..5923
DNA (594bp) protein (198aa)
tRNA/rRNA methyltransferase (SpoU) n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SF39_RHOMR
tRNA/rRNA methyltransferase SpoU
tRNA/rRNA methyltransferase (SpoU) {ECO:0000313|EMBL:AEN73260.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodot
qs_4_scaffold_765_6
Chloroherpeton thalassium, Chloroherpeton, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

5920..7797
DNA (1878bp) protein (626aa)
methylmalonyl-CoA mutase (EC:5.4.99.2)
Methylmalonyl-CoA mutase {ECO:0000313|EMBL:ACF13318.1}; EC=5.4.99.2 {ECO:0000313|EMBL:ACF13318.1};; TaxID=517418 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chloroherpeton.;"
methylmalonyl-CoA mutase n=1 Tax=Salisaeta longa RepID=UPI0003B39D05
qs_4_scaffold_765_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

7861..10047
DNA (2187bp) protein (729aa)
Methylmalonyl-CoA mutase large subunit {ECO:0000313|EMBL:CBH24925.1}; EC=5.4.99.2 {ECO:0000313|EMBL:CBH24925.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis;
methylmalonyl-CoA mutase n=1 Tax=Salisaeta longa RepID=UPI0003B5F57E
mutB; methylmalonyl-CoA mutase large subunit
qs_4_scaffold_765_8
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10141..10869)
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U0W2_9CHLR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHY47713.1}; TaxID=42256 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubroba
qs_4_scaffold_765_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(11030..13999)
DNA (2970bp) protein (990aa)
Exonuclease SbcC n=2 Tax=Salinibacter ruber RepID=D5HAE2_SALRM
exonuclease SbcC
Exonuclease SbcC {ECO:0000313|EMBL:CBH24997.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter ruber (stra
qs_4_scaffold_765_10
Methylobacterium mesophilicum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14348..15874
DNA (1527bp) protein (509aa)
Pentapeptide repeat protein n=1 Tax=Methylobacterium mesophilicum SR1.6/6 RepID=M7Y654_9RHIZ
Pentapeptide repeat protein {ECO:0000313|EMBL:EMS42617.1}; TaxID=908290 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobac
pentapeptide repeat-containing protein
qs_4_scaffold_765_11
Cyanothece sp. PCC 7425, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(16059..16520)
DNA (462bp) protein (154aa)
chemotaxis protein CheY n=1 Tax=Spirulina subsalsa RepID=UPI000315FFAA
response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:ACL43135.1}; TaxID=395961 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC
qs_4_scaffold_765_12
Syntrophus aciditrophicus, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16594..19419)
DNA (2826bp) protein (942aa)
sensor proteinluxq (EC:2.7.3.-)
Sensor proteinLuxQ {ECO:0000313|EMBL:ABC78673.1}; EC=2.7.3.- {ECO:0000313|EMBL:ABC78673.1};; TaxID=56780 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Syn
Sensor proteinLuxQ n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LX64_SYNAS
qs_4_scaffold_765_13
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(19780..20307)
DNA (528bp) protein (176aa)
Colicin V production protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MJF2_RHOM4
colicin V production protein
Colicin V production protein {ECO:0000313|EMBL:ACY48610.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus
qs_4_scaffold_765_14
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(20390..20830)
DNA (441bp) protein (147aa)
hypothetical protein
hypothetical protein; K09117 hypothetical protein id=24659829 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
GatB/Yqey domain superfamily {ECO:0000313|EMBL:ABC46105.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter
qs_4_scaffold_765_15
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(20958..22898)
DNA (1941bp) protein (647aa)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000256|PIRNR:PIRNR000732}; EC=2.7.3.9 {ECO:0000256|PIRNR:PIRNR000732};; Phosphotransferase system, enzyme I {ECO:0000256|PIRNR:PIRNR000732}; TaxID=
Phosphoenolpyruvate-protein phosphotransferase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MI19_RHOM4
phosphoenolpyruvate-protein phosphotransferase
qs_4_scaffold_765_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(23114..26257)
DNA (3144bp) protein (1048aa)
Acriflavine resistance protein (Cation efflux system) n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S3C4_SALRD
Acriflavine resistance protein (Cation efflux system) {ECO:0000313|EMBL:CBH24288.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacte
acrF; acriflavine resistance protein
qs_4_scaffold_765_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(26395..27696)
DNA (1302bp) protein (434aa)
hemolysin D n=1 Tax=Salisaeta longa RepID=UPI0003B381E7
membrane efflux protein
Putative membrane efflux protein {ECO:0000313|EMBL:ABC44622.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Saliniba
qs_4_scaffold_765_18
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

28235..29395
DNA (1161bp) protein (387aa)
histidine kinase n=1 Tax=Salisaeta longa RepID=UPI0003B3BB82
two-component signal transduction histidine kinase
Two-component signal transduction histidine kinase {ECO:0000313|EMBL:CBH25471.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;
qs_4_scaffold_765_19
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

29449..30303
DNA (855bp) protein (285aa)
Two component transcriptional regulator, LytTR family n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MJT5_RHOM4
LytTR family two component transcriptional regulator
Two component transcriptional regulator, LytTR family {ECO:0000313|EMBL:ACY48743.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermu
qs_4_scaffold_765_20
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(30671..30940)
DNA (270bp) protein (90aa)
Plasmid stabilization system n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SHP5_RHOMR
plasmid stabilization system
Plasmid stabilization system {ECO:0000313|EMBL:AEN73361.1}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus
qs_4_scaffold_765_21
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(30937..31149)
DNA (213bp) protein (71aa)
Uncharacterized protein n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=D6SRQ5_9DELT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
hypothetical protein
qs_4_scaffold_765_22
Limnoraphis robusta, Limnoraphis, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(31548..31772)
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Leptolyngbya sp. PCC 6406 RepID=L8LA49_9CYAN
Uncharacterized protein {ECO:0000313|EMBL:KKD36713.1}; TaxID=1637645 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Limnoraphis.;" source="Limnoraphis robusta CS-951.;"
hypothetical protein
qs_4_scaffold_765_23
CG_Delta_05, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31772..32251)
DNA (480bp) protein (160aa)
hypothetical protein n=1 Tax=Thiothrix flexilis RepID=UPI0003697269
hypothetical protein Tax=CG_Delta_05
hypothetical protein
qs_4_scaffold_765_24
unknown

Not on your lists

comp(32600..33178)
DNA (579bp) protein (193aa)

This feature has no annotations

qs_4_scaffold_765_25
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(33318..34445)
DNA (1128bp) protein (376aa)
Hypothetical periplasmic protein n=1 Tax=Zobellia galactanivorans (strain DSM 12802 / CIP 106680 / NCIMB 13871 / Dsij) RepID=G0KZI6_ZOBGA
hypothetical protein Tax=GWC2_Ignavibacteria_rel_36_12_curated
hypothetical protein
Displaying 25 items

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