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qs_4_scaffold_1115

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_4_scaffold_1115_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(3..1193)
DNA (1191bp) protein (397aa)
elongation factor Tu n=1 Tax=Salisaeta longa RepID=UPI0003B38A18
tuf; elongation factor Tu
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Orde
qs_4_scaffold_1115_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(1263..3374)
DNA (2112bp) protein (704aa)
elongation factor P n=1 Tax=Salisaeta longa RepID=UPI0003B6E354
fusA; translation elongation factor G (EF-G)
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodotherma
qs_4_scaffold_1115_3
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(3496..4008)
DNA (513bp) protein (171aa)
30S ribosomal protein S7 n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MGV0_RHOM4
30S ribosomal protein S7
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus
qs_4_scaffold_1115_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(4070..4444)
DNA (375bp) protein (125aa)
rpsL; 30S ribosomal protein S12
rpsL; 30S ribosomal protein S12; K02950 small subunit ribosomal protein S12 id=24658953 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Sali
qs_4_scaffold_1115_5
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(4621..6888)
DNA (2268bp) protein (756aa)
ATP-dependent metalloprotease FtsH (EC:3.6.4.3)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incert
ATPase AAA n=1 Tax=Salisaeta longa RepID=UPI0003B3A6FB
qs_4_scaffold_1115_6
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(7187..9895)
DNA (2709bp) protein (903aa)
Tetratricopeptide TPR_4 n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MGU7_RHOM4
hypothetical protein
Tetratricopeptide TPR_4 {ECO:0000313|EMBL:ACY47732.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus mari
qs_4_scaffold_1115_7
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(10059..11513)
DNA (1455bp) protein (485aa)
pyruvate kinase (EC:2.7.1.40)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; R
pyruvate kinase n=1 Tax=Salisaeta longa RepID=UPI0003B6E51C
qs_4_scaffold_1115_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(11600..12733)
DNA (1134bp) protein (378aa)
IS605 family transposase orfB
IS605 family transposase orfB; K07496 putative transposase id=24657500 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
IS605 family transposase orfB {ECO:0000313|EMBL:ABC45421.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacte
qs_4_scaffold_1115_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(13020..14108)
DNA (1089bp) protein (363aa)
Peptidase, M50 family protein {ECO:0000313|EMBL:ABC46174.1}; EC=3.4.24.- {ECO:0000313|EMBL:ABC46174.1};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothe
Peptidase, M50 family protein n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S3S3_SALRD
peptidase, M50 family protein
qs_4_scaffold_1115_10
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(14604..15038)
DNA (435bp) protein (145aa)
hypothetical protein
hypothetical protein id=24658947 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24145.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_4_scaffold_1115_11
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15378..15584)
DNA (207bp) protein (69aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B33762
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ15528.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgal
qs_4_scaffold_1115_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

15918..17543
DNA (1626bp) protein (542aa)
NAD dependent epimerase/dehydratase family n=2 Tax=Salinibacter ruber RepID=D5H7Y8_SALRM
NAD dependent epimerase/dehydratase family
NAD dependent epimerase/dehydratase family {ECO:0000313|EMBL:CBH24143.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source
qs_4_scaffold_1115_13
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(17618..18097)
DNA (480bp) protein (160aa)
mitochondrial benzodiazepine receptor/sensory transduction protein
mitochondrial benzodiazepine receptor/sensory transduction protein; K07185 tryptophan-rich sensory protein id=24658944 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Mitochondrial benzodiazepine receptor/sensory transduction protein {ECO:0000313|EMBL:CBH24142.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae
qs_4_scaffold_1115_14
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(18206..18604)
DNA (399bp) protein (133aa)
Phosphoribosyl-AMP cyclohydrolase {ECO:0000256|HAMAP-Rule:MF_01021, ECO:0000256|SAAS:SAAS00006950}; Short=PRA-CH {ECO:0000256|HAMAP-Rule:MF_01021};; EC=3.5.4.19 {ECO:0000256|HAMAP-Rule:MF_01021, ECO:0
Phosphoribosyl-AMP cyclohydrolase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MGF2_RHOM4
phosphoribosyl-AMP cyclohydrolase
qs_4_scaffold_1115_15
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

19056..19592
DNA (537bp) protein (179aa)
Molybdenum cofactor synthesis domain protein n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SFG2_RHOMR
molybdenum cofactor synthesis domain-containing protein
Molybdenum cofactor biosynthesis protein B {ECO:0000256|PIRNR:PIRNR006443}; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" sour
qs_4_scaffold_1115_16
Novosphingobium sp. P6W, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20238..20684
DNA (447bp) protein (149aa)
AraC family transcriptional regulator n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B6524E
Scaffold5, whole genome shotgun sequence {ECO:0000313|EMBL:KIS32302.1}; TaxID=1609758 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" so
AraC family transcriptional regulator
qs_4_scaffold_1115_17
CNBR_ACIDO, CNBR_ACIDO, CNBR_ACIDO, CNBR_ACIDO, Acidobacteria, Bacteria

Not on your lists

20681..21070
DNA (390bp) protein (130aa)
hypothetical protein id=12553989 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein id=12553989 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
qs_4_scaffold_1115_18
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

21067..21714
DNA (648bp) protein (216aa)
signal peptidase I (EC:3.4.21.89); K03100 signal peptidase I [EC:3.4.21.89] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Putative signal peptidase I n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AE20_GEMAT
putative signal peptidase I
qs_4_scaffold_1115_19
RLO_PLX_64_10, Bacteria

Not on your lists

21815..24157
DNA (2343bp) protein (781aa)
ABC transporter permease n=1 Tax=Spirosoma panaciterrae RepID=UPI0003797400
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
cell division protein FtsX
qs_4_scaffold_1115_20
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(24216..24422)
DNA (207bp) protein (69aa)
hypothetical protein
hypothetical protein id=24658948 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24146.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_4_scaffold_1115_21
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

24475..25962
DNA (1488bp) protein (496aa)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:00
Cysteine--tRNA ligase n=1 Tax=Rhodothermus marinus RepID=Q9RG13_RHOMR
cysteinyl-tRNA synthetase
qs_4_scaffold_1115_22
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

26136..27158
DNA (1023bp) protein (341aa)
porphobilinogen synthase (EC:4.2.1.24)
Delta-aminolevulinic acid dehydratase {ECO:0000256|RuleBase:RU000515}; EC=4.2.1.24 {ECO:0000256|RuleBase:RU000515};; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sed
Delta-aminolevulinic acid dehydratase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MGE7_RHOM4
qs_4_scaffold_1115_23
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

27315..27845
DNA (531bp) protein (177aa)
hypothetical protein
hypothetical protein id=24658933 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24131.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_4_scaffold_1115_24
Nitrospina gracilis, Nitrospina, Nitrospinales, Nitrospinia, Nitrospinae, Bacteria

Not on your lists

comp(28106..28672)
DNA (567bp) protein (189aa)
Inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00209}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_00209};; Pyrophosphate phospho-hydrolase {ECO:0000256|HAMAP-Rule:MF_00209}; TaxID=1266370 species="Ba
inorganic diphosphatase (EC:3.6.1.1)
Inorganic pyrophosphatase n=1 Tax=Nitrospina gracilis 3/211 RepID=M1YVH0_9BACT
qs_4_scaffold_1115_25
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28979..30139)
DNA (1161bp) protein (387aa)
Ribonuclease BN n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LZF9_HALO1
ribonuclease BN
Ribonuclease BN {ECO:0000313|EMBL:ACY16421.1}; TaxID=502025 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="Haliangium ochrace
qs_4_scaffold_1115_26
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(30422..34810)
DNA (4389bp) protein (1463aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae;
Sensory transduction histidine kinase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H6U4_SALRM
ntrB; sensory transduction histidine kinase
qs_4_scaffold_1115_27
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(34865..35320)
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MG74_RHOM4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY47630.1}; Flags: Precursor;; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source
qs_4_scaffold_1115_28
Rhodonellum psychrophilum, Rhodonellum, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(35637..36626)
DNA (990bp) protein (330aa)
Uncharacterized protein n=1 Tax=Rhodonellum psychrophilum GCM71 = DSM 17998 RepID=U5BQ63_9BACT
Uncharacterized protein {ECO:0000313|EMBL:ERM82710.1}; TaxID=1123057 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Rhodonellum.;" source="Rhodonellum psychrophilum GCM71 =
hypothetical protein
qs_4_scaffold_1115_29
Gramella forsetii, Gramella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(36683..37699)
DNA (1017bp) protein (339aa)
Putative uncharacterized protein n=1 Tax=Gramella forsetii (strain KT0803) RepID=A0LZF5_GRAFK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAL65750.1}; TaxID=411154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Gramella.;" source="Gramella forsetii (strain
qs_4_scaffold_1115_30
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

comp(37976..40195)
DNA (2220bp) protein (740aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B45FBC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL98950.1}; TaxID=926550 species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 1
Displaying items 1-30 of 35 in total

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