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qs_4_scaffold_624

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_4_scaffold_624_1
RBG_13_Planctomycetes_60_9_curated, Phycisphaerae, Planctomycetes, Bacteria

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comp(2..928)
DNA (927bp) protein (309aa)
xylanase (EC:3.2.1.-); K01238 [EC:3.2.1.-] Tax=RBG_13_Planctomycetes_60_9_curated
b-glycosidase (EC:3.2.1.-)
hypothetical protein n=1 Tax=Cytophaga aurantiaca RepID=UPI00035CFE20
qs_4_scaffold_624_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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1960..2604
DNA (645bp) protein (215aa)
Imidazoleglycerol-phosphate dehydratase {ECO:0000256|HAMAP-Rule:MF_00076, ECO:0000256|SAAS:SAAS00218099}; Short=IGPD {ECO:0000256|HAMAP-Rule:MF_00076};; EC=4.2.1.19 {ECO:0000256|HAMAP-Rule:MF_00076, E
imidazoleglycerol-phosphate dehydratase n=1 Tax=Salisaeta longa RepID=UPI0003B685C0
hisB; imidazoleglycerol-phosphate dehydratase
qs_4_scaffold_624_3
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

2695..3528
DNA (834bp) protein (278aa)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMA
Pyrroline-5-carboxylate reductase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SK94_RHOMR
pyrroline-5-carboxylate reductase
qs_4_scaffold_624_4
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

3649..4329
DNA (681bp) protein (227aa)
Imidazole glycerol phosphate synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00278, ECO:0000313|EMBL:CBH24680.1};; IGP synthase glutamine amidotransferas
imidazole glycerol phosphate synthase n=1 Tax=Salisaeta longa RepID=UPI0003B74105
hisH; imidazole glycerol phosphate synthase, glutamine amidotransferase subunit
qs_4_scaffold_624_5
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

4389..5201
DNA (813bp) protein (271aa)
1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino) imidazole-4-carboxamide isomerase (EC:5.3.1.16)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658}; EC=5.3.1.16 {ECO:0000256|HAMAP-Rule
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Salisaeta longa RepID=UPI0003B485E6
qs_4_scaffold_624_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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5298..6146
DNA (849bp) protein (283aa)
hisF; Imidazole glycerol phosphate synthase cyclase subunit; K02500 cyclase [EC:4.1.3.-] id=24659518 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Imidazole glycerol phosphate synthase subunit HisF {ECO:0000255|HAMAP-Rule:MF_01013}; EC=4.1.3.- {ECO:0000255|HAMAP-Rule:MF_01013};; IGP synthase cyclase subunit {ECO:0000255|HAMAP-Rule:MF_01013}; IGP
hisF; Imidazole glycerol phosphate synthase cyclase subunit
qs_4_scaffold_624_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

6139..6507
DNA (369bp) protein (123aa)
hypothetical protein
hypothetical protein id=24659519 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH24684.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
qs_4_scaffold_624_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

7119..8402
DNA (1284bp) protein (428aa)
Adenosylhomocysteinase {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548}; EC=3.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548};; S-adenosyl-L-homocysteine hydrola
S-adenosyl-L-homocysteine hydrolase n=1 Tax=Salisaeta longa RepID=UPI0003B4C95C
ahcY; adenosylhomocysteinase
qs_4_scaffold_624_9
unknown

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8425..8697
DNA (273bp) protein (91aa)

This feature has no annotations

qs_4_scaffold_624_10
Photorhabdus luminescens, Photorhabdus, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8828..9298)
DNA (471bp) protein (157aa)
Uncharacterized protein n=2 Tax=Photorhabdus temperata RepID=U7QTG1_PHOTE
Uncharacterized protein {ECO:0000313|EMBL:KGM28272.1}; TaxID=29488 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Photorhabdus.;" source="Photorhabdus l
qs_4_scaffold_624_11
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(9304..10200)
DNA (897bp) protein (299aa)
3-hydroxy-3-methylglutaryl-CoA lyase; K01640 hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] id=24659190 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
3-hydroxy-3-methylglutaryl-CoA lyase
3-hydroxy-3-methylglutaryl-CoA lyase {ECO:0000313|EMBL:ABC45946.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sali
qs_4_scaffold_624_12
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(10240..11865)
DNA (1626bp) protein (542aa)
Aminotransferase, class V superfamily n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H895_SALRM
aminotransferase class V superfamily protein
Aminotransferase, class V superfamily {ECO:0000313|EMBL:CBH24250.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Sal
qs_4_scaffold_624_13
Puccinia graminis, Puccinia, Pucciniales, Pucciniomycetes, Basidiomycota, Fungi

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12020..12616
DNA (597bp) protein (199aa)
Putative uncharacterized protein n=1 Tax=Puccinia graminis f. sp. tritici (strain CRL 75-36-700-3 / race SCCL) RepID=E3L698_PUCGT
Putative uncharacterized protein {ECO:0000313|EMBL:EFP92073.1}; TaxID=418459 species="Eukaryota; Fungi; Dikarya; Basidiomycota; Pucciniomycotina; Pucciniomycetes; Pucciniales; Pucciniaceae; Puccinia.;
apolipoprotein A1/A4/E
qs_4_scaffold_624_14
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(12678..13724)
DNA (1047bp) protein (349aa)
Uncharacterized protein n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SEW3_RHOMR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN72881.1}; Flags: Precursor;; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source
qs_4_scaffold_624_15
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(13783..15459)
DNA (1677bp) protein (559aa)
RNA polymerase sigma54 factor n=1 Tax=Salisaeta longa RepID=UPI0003B65135
rpoN; RNA polymerase sigma-54 factor
RNA polymerase sigma-54 factor {ECO:0000313|EMBL:ABC45404.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibact
qs_4_scaffold_624_16
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

15718..16758
DNA (1041bp) protein (347aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000255|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000255|HAMAP-Rule:MF_00016};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order
Holliday junction ATP-dependent DNA helicase RuvB n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=RUVB_SALRD
ruvB; Holliday junction DNA helicase RuvB
qs_4_scaffold_624_17
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

17330..17956
DNA (627bp) protein (209aa)
oxidoreductase n=1 Tax=Salisaeta longa RepID=UPI0003B5FA57
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ACY47100.1}; Flags: Precursor;; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodot
qs_4_scaffold_624_18
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

18234..19526
DNA (1293bp) protein (431aa)
Putative sulfolipid synthase n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S5E1_SALRD
sulfolipid synthase
Putative sulfolipid synthase {ECO:0000313|EMBL:ABC44424.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter
qs_4_scaffold_624_19
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

19565..20713
DNA (1149bp) protein (383aa)
glycoside hydrolase; K00754 [EC:2.4.1.-] id=24657294 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
group 1 glycosyl transferase
Glycosyl transferase group 1 {ECO:0000313|EMBL:ACY49608.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus
qs_4_scaffold_624_20
unknown

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comp(20973..21056)
DNA (84bp) protein (28aa)

This feature has no annotations

Displaying 20 items

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